RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ETNPPLQ8TBG4 499 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 CREB3L4Q8TEY5 395 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 VOPP1Q96AW1 172 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 PERPQ96FX8 193 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 PIP5K1AQ99755 562 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 TREX2Q9BQ50 279 aaPredicted RBP4.66□□□□□ -1.66
CCDC54-201ENST00000261058 MSTO1Q9BUK6 570 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 STRA6Q9BX79 667 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 PDCL3Q9H2J4 239 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 MUC13Q9H3R2 512 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 PCDHB16Q9NRJ7 776 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 BLOC1S4Q9NUP1 217 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 ANKRD10Q9NXR5 420 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 NDRG3Q9UGV2 375 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 A4GNTQ9UNA3 340 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 SCINQ9Y6U3 715 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 PIAS3Q9Y6X2 628 aa4.66□□□□□ -1.66
CCDC54-201ENST00000261058 IGLV5-39A0A0G2JS06 123 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 PI4KAP2A4QPH2 592 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 HSPB2A8KAH6 182 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 KLRF2D3W0D1 207 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 NPIPB11E5RHQ5 1161 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 IFNL4K9M1U5 179 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 SLC25A17O43808 307 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 KLK8O60259 260 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 TMEM191BP0C7N4 346 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 ITGAXP20702 1163 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 MCCP23508 829 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 POU1F1P28069 291 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 RFC1P35251 1148 aaPredicted RBP4.65□□□□□ -1.66
CCDC54-201ENST00000261058 CASP2P42575 452 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 POLD2P49005 469 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 LAMB3Q13751 1172 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 RABEP1Q15276 862 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 HSPB2Q16082 182 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 ODF3L2Q3SX64 289 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 MANEAQ5SRI9 462 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 CCDC30Q5VVM6 783 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 ZNF425Q6IV72 752 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 CDC73Q6P1J9 531 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 SLC16A12Q6ZSM3 486 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 TRILQ7L0X0 811 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 NGEFQ8N5V2 710 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 NRACQ8N912 160 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 CADM4Q8NFZ8 388 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 NEK9Q8TD19 979 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 TMEM18Q96B42 140 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 VCPIP1Q96JH7 1222 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 MAP7D2Q96T17 732 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 YME1L1Q96TA2 773 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 H2AFJQ9BTM1 129 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 ANP32EQ9BTT0 268 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 CDT1Q9H211 546 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 SCPEP1Q9HB40 452 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 SIRT3Q9NTG7 399 aaPredicted RBP4.65□□□□□ -1.66
CCDC54-201ENST00000261058 TBC1D22BQ9NU19 505 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 SLCO3A1Q9UIG8 710 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 INTS6Q9UL03 887 aaKnown RBP4.65□□□□□ -1.66
CCDC54-201ENST00000261058 CARD8Q9Y2G2 431 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 PSAT1Q9Y617 370 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 CAPN7Q9Y6W3 813 aa4.65□□□□□ -1.66
CCDC54-201ENST00000261058 A0A1W2PQF6 199 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 SOCS2O14508 198 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 LDB2O43679 373 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 PAGE4O60829 102 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 SEC31AO94979 1220 aaKnown RBP4.64□□□□□ -1.67
CCDC54-201ENST00000261058 SOX30O94993 753 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 TFP02787 698 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 HSPA1AP0DMV8 641 aaKnown RBP4.64□□□□□ -1.67
CCDC54-201ENST00000261058 HSPA1BP0DMV9 641 aaKnown RBP4.64□□□□□ -1.67
CCDC54-201ENST00000261058 PCNAP12004 261 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 AGAP20933 346 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 BDNFP23560 247 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 CDH12P55289 794 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 HDAC4P56524 1084 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 RPS3AP61247 264 aaKnown RBP4.64□□□□□ -1.67
CCDC54-201ENST00000261058 NEXNQ0ZGT2 675 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 DCTN2Q13561 401 aaKnown RBP4.64□□□□□ -1.67
CCDC54-201ENST00000261058 LPIN1Q14693 890 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 GSTA3Q16772 222 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 HIST2H2ACQ16777 129 aaPredicted RBP4.64□□□□□ -1.67
CCDC54-201ENST00000261058 HAUS3Q68CZ6 603 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 MZT2BQ6NZ67 158 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 PATL1Q86TB9 770 aaKnown RBP4.64□□□□□ -1.67
CCDC54-201ENST00000261058 DHX40Q8IX18 779 aaKnown RBP4.64□□□□□ -1.67
CCDC54-201ENST00000261058 KIAA2013Q8IYS2 634 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 KCNG4Q8TDN1 519 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 SLC35F5Q8WV83 523 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 ZNF778Q96MU6 729 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 CHCHD6Q9BRQ6 235 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 NPFFR1Q9GZQ6 430 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 PRKRIP1Q9H875 184 aaPredicted RBP4.64□□□□□ -1.67
CCDC54-201ENST00000261058 MAP3K20Q9NYL2 800 aaKnown RBP4.64□□□□□ -1.67
CCDC54-201ENST00000261058 ELOVL5Q9NYP7 299 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 ABI3Q9P2A4 366 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 FBXO9Q9UK97 447 aaPredicted RBP4.64□□□□□ -1.67
CCDC54-201ENST00000261058 A3GALT2U3KPV4 340 aa4.64□□□□□ -1.67
CCDC54-201ENST00000261058 ZC3H11AO75152 810 aaKnown RBP eCLIP4.63□□□□□ -1.67
CCDC54-201ENST00000261058 CCNDBP1O95273 360 aa4.63□□□□□ -1.67
CCDC54-201ENST00000261058 MLYCDO95822 493 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms