RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 LACTB2Q53H82 288 aaPredicted RBP22.89■■□□□ 1.25
CDX1-201ENST00000231656 FAM78AQ5JUQ0 283 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 OR52K2Q8NGK3 314 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 BHMTQ93088 406 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 MFSD3Q96ES6 412 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 ASB16Q96NS5 453 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 CPNE1Q99829 537 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 FICDQ9BVA6 458 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 KIFC1Q9BW19 673 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 CHRAC1Q9NRG0 131 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 PCMTD2Q9NV79 361 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 GDE1Q9NZC3 331 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 TBC1D30Q9Y2I9 924 aa22.89■■□□□ 1.25
CDX1-201ENST00000231656 CRHR1P34998 444 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 GP5P40197 560 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 COL19A1Q14993 1142 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 SMAD1Q15797 465 aaKnown RBP22.88■■□□□ 1.25
CDX1-201ENST00000231656 MPPE1Q53F39 396 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 TPGS1Q6ZTW0 290 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 SETD3Q86TU7 594 aaPredicted RBP22.88■■□□□ 1.25
CDX1-201ENST00000231656 CNPY4Q8N129 248 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 ACMSDQ8TDX5 336 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 DDI1Q8WTU0 396 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 PTPRN2Q92932 1015 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 LRCH3Q96II8 777 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 LRRC3BQ96PB8 259 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 IQCGQ9H095 443 aaKnown RBP22.88■■□□□ 1.25
CDX1-201ENST00000231656 SLC25A51Q9H1U9 297 aa22.88■■□□□ 1.25
CDX1-201ENST00000231656 ALDOAP04075 364 aaKnown RBP22.87■■□□□ 1.25
CDX1-201ENST00000231656 ITGA2BP08514 1039 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 NMBRP28336 390 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 VIPR2P41587 438 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 SERPINB4P48594 390 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 RENBPP51606 427 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 TNK2Q07912 1038 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 GRTP1Q5TC63 336 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 CXorf57Q6NSI4 855 aaKnown RBP22.87■■□□□ 1.25
CDX1-201ENST00000231656 KDELC1Q6UW63 502 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 CCDC117Q8IWD4 279 aaPredicted RBP22.87■■□□□ 1.25
CDX1-201ENST00000231656 NDUFAF2Q8N183 169 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 TEX26Q8N6G2 289 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 SMARCD2Q92925 531 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 RSPRY1Q96DX4 576 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 MRGPRX2Q96LB1 330 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 MAGEH1Q9H213 219 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 SP110Q9HB58 689 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 TBC1D14Q9P2M4 693 aa22.87■■□□□ 1.25
CDX1-201ENST00000231656 UNC80Q8N2C7 3258 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 A0A0D9SEW6 157 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 ACVRL1P37023 503 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 GNA12Q03113 381 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 SLC10A7Q0GE19 358 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 SERINC3Q13530 473 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 MPP7Q5T2T1 576 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 TEDDM1Q5T9Z0 273 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 OTOAQ7RTW8 1153 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 TRPM8Q7Z2W7 1104 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 MICALL1Q8N3F8 863 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 CARNMT1Q8N4J0 409 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 PABPC5Q96DU9 382 aaKnown RBP22.86■■□□□ 1.25
CDX1-201ENST00000231656 MSLNLQ96KJ4 702 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 PLCD4Q9BRC7 762 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 SLC13A1Q9BZW2 595 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 LINC00597Q9H2U6 94 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 MANSC1Q9H8J5 431 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 ILVBLA1L0T0 632 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 H0Y626 953 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 TPP1O14773 563 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 PMPCBO75439 489 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 NEBLO76041 1014 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 LUC7L3O95232 432 aaKnown RBP22.86■■□□□ 1.25
CDX1-201ENST00000231656 RHOCP08134 193 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 HOXD9P28356 352 aaPredicted RBP22.86■■□□□ 1.25
CDX1-201ENST00000231656 MPP3Q13368 585 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 PCID2Q5JVF3 399 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 RANBP10Q6VN20 620 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 ZNF354CQ86Y25 554 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 IMP4Q96G21 291 aaKnown RBP22.86■■□□□ 1.25
CDX1-201ENST00000231656 NT5MQ9NPB1 228 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 ABCF3Q9NUQ8 709 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 PLK2Q9NYY3 685 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 CDH7Q9ULB5 785 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 WNT6Q9Y6F9 365 aa22.86■■□□□ 1.25
CDX1-201ENST00000231656 IL10RBQ08334 325 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 FSCBQ5H9T9 825 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 MARC1Q5VT66 337 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 RNF43Q68DV7 783 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 PKN3Q6P5Z2 889 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 KCNMB4Q86W47 210 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 CCDC63Q8NA47 563 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 OR7D4Q8NG98 312 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 RIPOR3Q96MK2 946 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 ZNF778Q96MU6 729 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 AGAP2Q99490 1192 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 GAS2L1Q99501 681 aaPredicted RBP22.85■■□□□ 1.25
CDX1-201ENST00000231656 RBBP8Q99708 897 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 TXNDC16Q9P2K2 825 aa22.85■■□□□ 1.25
CDX1-201ENST00000231656 PRUNE2Q8WUY3 3088 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 FSBPO95073 299 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 CYBBP04839 570 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms