RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 SLC12A1Q13621 1099 aa18.32■□□□□ 0.52
VIM-201ENST00000224237 MROH9Q5TGP6 573 aa18.32■□□□□ 0.52
VIM-201ENST00000224237 KIAA0930Q6ICG6 404 aaPredicted RBP18.32■□□□□ 0.52
VIM-201ENST00000224237 TIFABQ6ZNK6 161 aa18.32■□□□□ 0.52
VIM-201ENST00000224237 TAX1BP1Q86VP1 789 aa18.32■□□□□ 0.52
VIM-201ENST00000224237 DENND1AQ8TEH3 1009 aa18.32■□□□□ 0.52
VIM-201ENST00000224237 APOPT1Q96IL0 206 aa18.32■□□□□ 0.52
VIM-201ENST00000224237 KLF6Q99612 283 aaPredicted RBP18.32■□□□□ 0.52
VIM-201ENST00000224237 CDCA3Q99618 268 aaPredicted RBP18.32■□□□□ 0.52
VIM-201ENST00000224237 MLXIPLQ9NP71 852 aa18.32■□□□□ 0.52
VIM-201ENST00000224237 CCDC78A2IDD5 438 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 HMX2A2RU54 273 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 PAPSS2O95340 614 aaPredicted RBP18.31■□□□□ 0.52
VIM-201ENST00000224237 NDST3O95803 873 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 SEC24CP53992 1094 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 SMAD1Q15797 465 aaKnown RBP18.31■□□□□ 0.52
VIM-201ENST00000224237 RALGPS1Q5JS13 557 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 ESRP1Q6NXG1 681 aaKnown RBP18.31■□□□□ 0.52
VIM-201ENST00000224237 NLRP9Q7RTR0 991 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 METTL3Q86U44 580 aaKnown RBP18.31■□□□□ 0.52
VIM-201ENST00000224237 ARID3BQ8IVW6 561 aaPredicted RBP18.31■□□□□ 0.52
VIM-201ENST00000224237 APCDD1Q8J025 514 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 ZNF557Q8N988 423 aaPredicted RBP18.31■□□□□ 0.52
VIM-201ENST00000224237 ITFG1Q8TB96 612 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 OTUB2Q96DC9 234 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 TRIB3Q96RU7 358 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 CDH22Q9UJ99 828 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 CLEC4EQ9ULY5 219 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 C2orf16Q68DN1 1984 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 CXorf51AA0A1B0GTR3 108 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 RFPL1O75677 317 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 ASMTLO95671 621 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 PENKP01210 267 aaPredicted RBP18.31■□□□□ 0.52
VIM-201ENST00000224237 ITGA2BP08514 1039 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 ALADP13716 330 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 SPRP35270 261 aaPredicted RBP18.31■□□□□ 0.52
VIM-201ENST00000224237 CCNFP41002 786 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 PLK1P53350 603 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 RHOAP61586 193 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 IL9RQ01113 521 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 LAMB3Q13751 1172 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 KCNC3Q14003 757 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 SEPT7Q16181 437 aaKnown RBP18.31■□□□□ 0.52
VIM-201ENST00000224237 PLEKHG6Q3KR16 790 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 STRA8Q7Z7C7 330 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 CNTN4Q8IWV2 1026 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 CHMP6Q96FZ7 201 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 AGAP2Q99490 1192 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 RBBP8Q99708 897 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 APOL5Q9BWW9 433 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 TDRD1Q9BXT4 1180 aaKnown RBP18.31■□□□□ 0.52
VIM-201ENST00000224237 IGFLR1Q9H665 355 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 IARS2Q9NSE4 1012 aaKnown RBP18.31■□□□□ 0.52
VIM-201ENST00000224237 LHX3Q9UBR4 397 aa18.31■□□□□ 0.52
VIM-201ENST00000224237 NUP210Q8TEM1 1887 aaPredicted RBP18.3■□□□□ 0.52
VIM-201ENST00000224237 FAM107AO95990 144 aa18.3■□□□□ 0.52
VIM-201ENST00000224237 CD70P32970 193 aa18.3■□□□□ 0.52
VIM-201ENST00000224237 ARCN1P48444 511 aaKnown RBP18.3■□□□□ 0.52
VIM-201ENST00000224237 CSE1LP55060 971 aaKnown RBP18.3■□□□□ 0.52
VIM-201ENST00000224237 GALNT3Q14435 633 aa18.3■□□□□ 0.52
VIM-201ENST00000224237 TSTD2Q5T7W7 516 aa18.3■□□□□ 0.52
VIM-201ENST00000224237 GDAP1Q8TB36 358 aa18.3■□□□□ 0.52
VIM-201ENST00000224237 TCP10LQ8TDR4 215 aa18.3■□□□□ 0.52
VIM-201ENST00000224237 CKAP2Q8WWK9 683 aa18.3■□□□□ 0.52
VIM-201ENST00000224237 IRF7Q92985 503 aa18.3■□□□□ 0.52
VIM-201ENST00000224237 PPP2R3CQ969Q6 453 aa18.3■□□□□ 0.52
VIM-201ENST00000224237 DZANK1Q9NVP4 752 aa18.3■□□□□ 0.52
VIM-201ENST00000224237 MKS1Q9NXB0 559 aa18.3■□□□□ 0.52
VIM-201ENST00000224237 MROH6A6NGR9 719 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 NDUFAB1O14561 156 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 COPEO14579 308 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 SLC9A3R1O14745 358 aaPredicted RBP18.29■□□□□ 0.52
VIM-201ENST00000224237 VAPBO95292 243 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 WEE1P30291 646 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 LIMK2P53671 638 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 WDR4P57081 412 aaKnown RBP18.29■□□□□ 0.52
VIM-201ENST00000224237 CNGA3Q16281 694 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 TMEM25Q86YD3 366 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 RNF135Q8IUD6 432 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 CELF5Q8N6W0 485 aaKnown RBP18.29■□□□□ 0.52
VIM-201ENST00000224237 ACMSDQ8TDX5 336 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 PEX13Q92968 403 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 MAGEB18Q96M61 343 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 BBS2Q9BXC9 721 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 IQCGQ9H095 443 aaKnown RBP18.29■□□□□ 0.52
VIM-201ENST00000224237 RABEP2Q9H5N1 569 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 SPHK2Q9NRA0 654 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 ABCB8Q9NUT2 735 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 SLC2A6Q9UGQ3 507 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 FCF1Q9Y324 198 aaKnown RBP18.29■□□□□ 0.52
VIM-201ENST00000224237 PRRC2BQ5JSZ5 2229 aaKnown RBP18.29■□□□□ 0.52
VIM-201ENST00000224237 NEDD8-MDP1E9PL57 170 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 GOLGA8TH3BQL2 631 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 ARNTP27540 789 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 HLA-FP30511 346 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 NEK3P51956 506 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 SLC20A2Q08357 652 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 NCEH1Q6PIU2 408 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 LVRNQ6Q4G3 990 aa18.29■□□□□ 0.52
VIM-201ENST00000224237 KIAA1958Q8N8K9 716 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms