RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 PRF1P14222 555 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 CD19P15391 556 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 HTR1BP28222 390 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 ALDH4A1P30038 563 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 L1CAMP32004 1257 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 RAB15P59190 212 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 ZXDCQ2QGD7 858 aaPredicted RBP11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 CRTC2Q53ET0 693 aaPredicted RBP11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 BRAPQ7Z569 592 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 FAM129CQ86XR2 697 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 FAM46DQ8NEK8 389 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 TAS1R2Q8TE23 839 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 DQX1Q8TE96 717 aaKnown RBP11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 CENPTQ96BT3 561 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 TCTN2Q96GX1 697 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 SLC39A13Q96H72 371 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 POM121Q96HA1 1249 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 C2orf49Q9BVC5 232 aaPredicted RBP11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 TNKS2Q9H2K2 1166 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 CYP4F12Q9HCS2 524 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 FBXO2Q9UK22 296 aaPredicted RBP11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 TLK1Q9UKI8 766 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 FRMD4BQ9Y2L6 1034 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 MED13Q9UHV7 2174 aa11.18□□□□□ -0.62
PTP4A1-207ENST00000639568 IGHV5-10-1A0A0J9YXX1 117 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 A0A1B0GTL3 188 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 TMEM110-MUSTN1A8MSY1 372 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 K7ERQ8 282 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 RNF103O00237 685 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 ENDOD1O94919 500 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 CD2BP2O95400 341 aaKnown RBP11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 RRM1P23921 792 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 VARSP26640 1264 aaKnown RBP11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 MAN1A1P33908 653 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 LEPRP48357 1165 aaKnown RBP11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 GCLMP48507 274 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 RGS7P49802 495 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 ABHD18Q0P651 414 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 TRA2AQ13595 282 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 CLPPQ16740 277 aaPredicted RBP11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 EDRF1Q3B7T1 1238 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 C14orf28Q4W4Y0 310 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 ZC3H12AQ5D1E8 599 aaKnown RBP11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 TAF8Q7Z7C8 310 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 ATP6V0D2Q8N8Y2 350 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 ATL2Q8NHH9 583 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 ALG14Q96F25 216 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 CCDC74BQ96LY2 380 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 RPRD1AQ96P16 312 aaPredicted RBP11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 TEFMQ96QE5 360 aaKnown RBP11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 TRIT1Q9H3H1 467 aaKnown RBP11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 DPEP2Q9H4A9 486 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 MMRN2Q9H8L6 949 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 SLC39A2Q9NP94 309 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 ITGB1BP2Q9UKP3 347 aa11.17□□□□□ -0.62
PTP4A1-207ENST00000639568 DOCK9Q9BZ29 2069 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 RHPN2P1A8MT19 583 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 KCNU1A8MYU2 1149 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 B4DGG1 531 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 INPP4BO15327 924 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 TNFP01375 233 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 IGFALSP35858 605 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 PEX5P50542 639 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 DNA2P51530 1060 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 CLCN6P51797 869 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 VAMP7P51809 220 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 OR1D5P58170 312 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 SRP54P61011 504 aaKnown RBP11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 B4GALNT1Q00973 533 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 BIRC2Q13490 618 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 INPP5JQ15735 1006 aaPredicted RBP11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 ALG11Q2TAA5 492 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 ANKS6Q68DC2 871 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 ENPP7Q6UWV6 458 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 DPY19L3Q6ZPD9 716 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 MCEMP1Q8IX19 187 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 RAB7BQ96AH8 199 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 FAM149B1Q96BN6 582 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 ARHGEF26Q96DR7 871 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 FAXDC2Q96IV6 333 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 NUDT22Q9BRQ3 303 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 UNKQ9C0B0 810 aaKnown RBP11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 MIS12Q9H081 205 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 KLQ9UEF7 1012 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 ENTPD4Q9Y227 616 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 POLHQ9Y253 713 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 CLIC4Q9Y696 253 aa11.16□□□□□ -0.62
PTP4A1-207ENST00000639568 B4E171 279 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 B4GAT1O43505 415 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 FBXO21O94952 628 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 TSPAN7P41732 249 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 PGDP52209 483 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 ERV3-1Q14264 604 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 HLTFQ14527 1009 aaKnown RBP eCLIP11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 NADK2Q4G0N4 442 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 C22orf39Q6P5X5 142 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 OGFOD3Q6PK18 319 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 PARS2Q7L3T8 475 aaKnown RBP11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 TAC4Q86UU9 113 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms