RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 CKAP5Q14008 2032 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 NYNRINQ9P2P1 1898 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 SPEGQ15772 3267 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 J3KR12 359 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 CBX4O00257 560 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 GIPC1O14908 333 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 PJA2O43164 708 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 TIMM44O43615 452 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 ASLP04424 464 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 COMTP21964 271 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 MAN1A1P33908 653 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 SSR1P43307 286 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 MAPKAPK2P49137 400 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 VAV2P52735 878 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 DAB2P98082 770 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 DPYSL3Q14195 570 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 LPAL2Q16609 132 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 HNRNPA1L2Q32P51 320 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 ACBD5Q5T8D3 534 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 TRMT11Q7Z4G4 463 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 CCNJLQ8IV13 435 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 LRRC8AQ8IWT6 810 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 RHOT2Q8IXI1 618 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 UMODL1-AS1Q8N2C9 162 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 SH2D3CQ8N5H7 860 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 CAMKK1Q8N5S9 505 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 ZNF557Q8N988 423 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 DCAF4L2Q8NA75 395 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 SUMF1Q8NBK3 374 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 PCDH19Q8TAB3 1148 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 TEKT4Q8WW24 435 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 NKD2Q969F2 451 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 SPON2Q9BUD6 331 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 BHLHE41Q9C0J9 482 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 SLC39A8Q9C0K1 460 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 KCNF1Q9H3M0 494 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 ATP13A1Q9HD20 1204 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 TMEM51Q9NW97 253 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 SERGEFQ9UGK8 458 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 SARDHQ9UL12 918 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 PLA2G4CQ9UP65 541 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 TRIM33Q9UPN9 1127 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 HS3ST2Q9Y278 367 aa9.66□□□□□ -0.86
NPLOC4-219ENST00000576713 GPR179Q6PRD1 2367 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 CHD5Q8TDI0 1954 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 A0A0A6YYK5 440 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 GRID2IPA4D2P6 1211 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 RASA4BC9J798 803 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 PLK4O00444 970 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 RASA4O43374 803 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 RAMP2O60895 175 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 GJB3O75712 270 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 ATP5BP06576 529 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 CTSLP07711 333 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 SRPRAP08240 638 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 ARHGAP25P42331 645 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 CDH6P55285 790 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 RPS14P62263 151 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 ADCY2Q08462 1091 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 SERINC3Q13530 473 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 SPA17Q15506 151 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 DLG2Q15700 870 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 BOLA3Q53S33 107 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 IL31Q6EBC2 164 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 NXPE4Q6UWF7 544 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 ADAMTSL4Q6UY14 1074 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 KBTBD6Q86V97 674 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 PSTKQ8IV42 348 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 CCDC117Q8IWD4 279 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 STK40Q8N2I9 435 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 PQLC3Q8N755 202 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 LRRC57Q8N9N7 239 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 CHST14Q8NCH0 376 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 OR2A12Q8NGT7 310 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 CCDC26Q8TAB7 109 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 UCMAQ8WVF2 138 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 KRT35Q92764 455 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 ZNF419Q96HQ0 510 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 NSMCE3Q96MG7 304 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 HERPUD2Q9BSE4 406 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 TNKS2Q9H2K2 1166 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 SEMA4AQ9H3S1 761 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 PDFQ9HBH1 243 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 PCDHGA2Q9Y5H1 932 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 ALG6Q9Y672 507 aa9.65□□□□□ -0.86
NPLOC4-219ENST00000576713 IGHV1OR15-9A0A0B4J2B8 117 aa9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 CCDC163A0A0D9SF12 145 aa9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 NPC1O15118 1278 aa9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 FGF10O15520 208 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 KDELR3O43731 214 aa9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 MFSD11O43934 449 aa9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 RPP40O75818 363 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 MOCS3O95396 460 aa9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 PEX11BO96011 259 aa9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 TNNT1P13805 278 aa9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 GKP32189 559 aa9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 P2RY2P41231 377 aa9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 NOP2P46087 812 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 HCAR3P49019 387 aa9.64□□□□□ -0.87
NPLOC4-219ENST00000576713 SERPINH1P50454 418 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms