RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 OR13H1Q8NG92 308 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 CPLX3Q8WVH0 158 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 SYN2Q92777 582 aaPredicted RBP14.87□□□□□ -0.03
FANCA-220ENST00000566409 CELF6Q96J87 481 aaKnown RBP14.87□□□□□ -0.03
FANCA-220ENST00000566409 FEM1CQ96JP0 617 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 BMFQ96LC9 184 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 KLHL32Q96NJ5 620 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 KLF6Q99612 283 aaPredicted RBP14.87□□□□□ -0.03
FANCA-220ENST00000566409 SLC17A9Q9BYT1 436 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 SLC39A8Q9C0K1 460 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 LHX3Q9UBR4 397 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 CAPN11Q9UMQ6 739 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 ITM2BQ9Y287 266 aa14.87□□□□□ -0.03
FANCA-220ENST00000566409 POM121BA6NF01 834 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 AREL1O15033 823 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 GYPCP04921 128 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 ITIH2P19823 946 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 HNRNPA2B1P22626 353 aaKnown RBP14.86□□□□□ -0.03
FANCA-220ENST00000566409 IL1R2P27930 398 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 HTR7P34969 479 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 ARRB1P49407 418 aaPredicted RBP14.86□□□□□ -0.03
FANCA-220ENST00000566409 RPS21P63220 83 aaKnown RBP14.86□□□□□ -0.03
FANCA-220ENST00000566409 ZBED6P86452 979 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 LRRC73Q5JTD7 316 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 AFMIDQ63HM1 303 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 GDPD4Q6W3E5 623 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 KDM7AQ6ZMT4 941 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 RFX8Q6ZV50 586 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 ABI3BPQ7Z7G0 1075 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 ARHGAP12Q8IWW6 846 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 TP53INP2Q8IXH6 220 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 SLC25A45Q8N413 288 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 EID2Q8N6I1 236 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 NPWQ8N729 165 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 CASKIN2Q8WXE0 1202 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 EXOC2Q96KP1 924 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 GDAP1L1Q96MZ0 367 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 C1QTNF2Q9BXJ5 285 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 GPR27Q9NS67 375 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 IFNKQ9P0W0 207 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 FTSJ1Q9UET6 329 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 ZMIZ1Q9ULJ6 1067 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 MFHAS1Q9Y4C4 1052 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 HS3ST3A1Q9Y663 406 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 NBEAQ8NFP9 2946 aa14.86□□□□□ -0.03
FANCA-220ENST00000566409 A0A087X0T9 212 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 IGLON5A6NGN9 336 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 EIF3CLB5ME19 914 aaKnown RBP14.85□□□□□ -0.03
FANCA-220ENST00000566409 EEF2KO00418 725 aaKnown RBP14.85□□□□□ -0.03
FANCA-220ENST00000566409 YKT6O15498 198 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 TSPAN6O43657 245 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 PRPSAP2O60256 369 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 MAGEC1O60732 1142 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 PRAMEF11O60813 436 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 SDC3O75056 442 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 RNF8O76064 485 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 FAM228BP0C875 321 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 MYBL1P10243 752 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 TIMP2P16035 220 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 ERCC2P18074 760 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 AKT2P31751 481 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 PAPOLAP51003 745 aaKnown RBP14.85□□□□□ -0.03
FANCA-220ENST00000566409 NDST2P52849 883 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 RHOAP61586 193 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 TPM4P67936 248 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 DNAJC3Q13217 504 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
FANCA-220ENST00000566409 PPP6R3Q5H9R7 873 aaPredicted RBP14.85□□□□□ -0.03
FANCA-220ENST00000566409 KIAA1161Q6NSJ0 714 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 ARHGAP36Q6ZRI8 547 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 TMPRSS7Q7RTY8 843 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 OXR1Q8N573 874 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 CNDP2Q96KP4 475 aaKnown RBP14.85□□□□□ -0.03
FANCA-220ENST00000566409 EIF3CQ99613 913 aaKnown RBP14.85□□□□□ -0.03
FANCA-220ENST00000566409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.85□□□□□ -0.03
FANCA-220ENST00000566409 OSBPL1AQ9BXW6 950 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 THAP2Q9H0W7 228 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 UCKL1Q9NWZ5 548 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 CWC15Q9P013 229 aaKnown RBP14.85□□□□□ -0.03
FANCA-220ENST00000566409 BZW2Q9Y6E2 419 aaKnown RBP14.85□□□□□ -0.03
FANCA-220ENST00000566409 SCINQ9Y6U3 715 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 MYLKQ15746 1914 aa14.85□□□□□ -0.03
FANCA-220ENST00000566409 GOLGA6L19H0YKK7 550 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 TAF4O00268 1085 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 ENC1O14682 589 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 BUB1BO60566 1050 aaPredicted RBP14.84□□□□□ -0.03
FANCA-220ENST00000566409 LDOC1O95751 146 aaPredicted RBP14.84□□□□□ -0.03
FANCA-220ENST00000566409 IGSF6O95976 241 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 SERPING1P05155 500 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 DESP17661 470 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 PCK1P35558 622 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 RGRP47804 291 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 DPYSQ14117 519 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 INAVAQ3KP66 663 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 CCDC157Q569K6 752 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 TDRD12Q587J7 1177 aaKnown RBP14.84□□□□□ -0.03
FANCA-220ENST00000566409 TPRG1LQ5T0D9 272 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 TXNRD3NBQ6F5E7 133 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 Q6ZSR6 202 aa14.84□□□□□ -0.03
FANCA-220ENST00000566409 TTC7BQ86TV6 843 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms