RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PCDHGB2Q9Y5G2 931 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 CABIN1Q9Y6J0 2220 aa15.96■□□□□ 0.15
USB1-208ENST00000563207 CXorf51AA0A1B0GTR3 108 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 FAM149AA5PLN7 773 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 LRRC72A6NJI9 287 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 FLRT2O43155 660 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 ZSCAN12O43309 604 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 SMAD6O43541 496 aaKnown RBP15.95■□□□□ 0.14
USB1-208ENST00000563207 ADH1BP00325 375 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 CTSLP07711 333 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 RHOCP08134 193 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 SRCP12931 536 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 CDH6P55285 790 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 YBEYP58557 167 aaPredicted RBP15.95■□□□□ 0.14
USB1-208ENST00000563207 TAS2R38P59533 333 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 ELAVL3Q14576 367 aaKnown RBP15.95■□□□□ 0.14
USB1-208ENST00000563207 ODF2Q5BJF6 829 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 TXNRD3NBQ6F5E7 133 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 CCNI2Q6ZMN8 369 aaPredicted RBP15.95■□□□□ 0.14
USB1-208ENST00000563207 RFX8Q6ZV50 586 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 SH2D3CQ8N5H7 860 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 LZTR1Q8N653 840 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 SERAC1Q96JX3 654 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 ZNF670Q9BS34 389 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 ACE2Q9BYF1 805 aaPredicted RBP15.95■□□□□ 0.14
USB1-208ENST00000563207 MUC3BQ9H195 1237 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 MAGEH1Q9H213 219 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 CWC15Q9P013 229 aaKnown RBP15.95■□□□□ 0.14
USB1-208ENST00000563207 PPM1HQ9ULR3 514 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 PPP2R2CQ9Y2T4 447 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 ACTL7AQ9Y615 435 aa15.95■□□□□ 0.14
USB1-208ENST00000563207 CELSR3Q9NYQ7 3312 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 A0A1B0GTQ1 180 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 MACROD2A1Z1Q3 448 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 DKK1O94907 266 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 CD38P28907 300 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 NNMTP40261 264 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 VASPP50552 380 aaPredicted RBP15.94■□□□□ 0.14
USB1-208ENST00000563207 CCT8P50990 548 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 CCR5P51681 352 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 ARSEP51690 589 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 C21orf59P57076 290 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 BNIP3Q12983 259 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 ZFYVE27Q5T4F4 411 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 AGBL4Q5VU57 503 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 SPATS2Q86XZ4 545 aaKnown RBP15.94■□□□□ 0.14
USB1-208ENST00000563207 UMODL1-AS1Q8N2C9 162 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 LRRC57Q8N9N7 239 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 CHST14Q8NCH0 376 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 OR7D4Q8NG98 312 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 PIP4K2CQ8TBX8 421 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 MDM1Q8TC05 714 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 TSC1Q92574 1164 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 KLK6Q92876 244 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 FAM131CQ96AQ9 280 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 C2orf49Q9BVC5 232 aaPredicted RBP15.94■□□□□ 0.14
USB1-208ENST00000563207 KCNF1Q9H3M0 494 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 PCDH18Q9HCL0 1135 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 VPS51Q9UID3 782 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 SLC25A13Q9UJS0 675 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 GUCA1BQ9UMX6 200 aa15.94■□□□□ 0.14
USB1-208ENST00000563207 APOBEC2Q9Y235 224 aaKnown RBP15.94■□□□□ 0.14
USB1-208ENST00000563207 CCDC66A2RUB6 948 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 GRID2IPA4D2P6 1211 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 TMEM8BA6NDV4 472 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 MCF2LO15068 1137 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 LATO43561 262 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 PCDHGA12O60330 932 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 RAMP2O60895 175 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 ERCC2P18074 760 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 KDELR1P24390 212 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 NDST2P52849 883 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 GNA12Q03113 381 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 DPYSQ14117 519 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 DPYSL3Q14195 570 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 PARP15Q460N3 678 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 ATP13A4Q4VNC1 1196 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 CPNE8Q86YQ8 564 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 OR2A12Q8NGT7 310 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 OR8D1Q8WZ84 308 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 ARRDC3Q96B67 414 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 CSPG4P5Q96PW8 444 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 MYOCQ99972 504 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 TNKS2Q9H2K2 1166 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 TRIM10Q9UDY6 481 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 AMFRQ9UKV5 643 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 LAMA5O15230 3695 aa15.93■□□□□ 0.14
USB1-208ENST00000563207 ITPR1Q14643 2758 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 MIF4GDA9UHW6 222 aaKnown RBP15.92■□□□□ 0.14
USB1-208ENST00000563207 PLRG1O43660 514 aaKnown RBP15.92■□□□□ 0.14
USB1-208ENST00000563207 ZNF821O75541 412 aaPredicted RBP15.92■□□□□ 0.14
USB1-208ENST00000563207 PALMO75781 387 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 HOXB3P14651 431 aaPredicted RBP15.92■□□□□ 0.14
USB1-208ENST00000563207 IL4RP24394 825 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 CTNNA1P35221 906 aaKnown RBP15.92■□□□□ 0.14
USB1-208ENST00000563207 SERPINB6P35237 376 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 GJC1P36383 396 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 SLC20A2Q08357 652 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 DNAJC3Q13217 504 aa15.92■□□□□ 0.14
USB1-208ENST00000563207 SUZ12Q15022 739 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 1047.5 ms