RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ZKSCAN2Q63HK3 967 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 SLC18B1Q6NT16 456 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 CYP20A1Q6UW02 462 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 FAM83HQ6ZRV2 1179 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-210ENST00000553455 YTHDF3Q7Z739 585 aaKnown RBP5.45□□□□□ -1.54
SYNE2-210ENST00000553455 GPSM1Q86YR5 675 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 DPP10Q8N608 796 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 TMEM116Q8NCL8 245 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 RASSF8Q8NHQ8 419 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 MRIQ9BWK5 157 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 STRA6Q9BX79 667 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 EIF2B3Q9NR50 452 aaKnown RBP5.45□□□□□ -1.54
SYNE2-210ENST00000553455 NSMCE4AQ9NXX6 385 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 CORO1CQ9ULV4 474 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-210ENST00000553455 ADAM18Q9Y3Q7 739 aa5.45□□□□□ -1.54
SYNE2-210ENST00000553455 A0A1W2PPC1 479 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 LIPT2A6NK58 231 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 AGAP14A8MT82 685 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 NPIPB11E5RHQ5 1161 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 ADAM10O14672 748 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 AHCYL1O43865 530 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 TLR2O60603 784 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 CENPBP07199 599 aaPredicted RBP5.44□□□□□ -1.54
SYNE2-210ENST00000553455 PTPN2P17706 415 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 TNFSF8P32971 234 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 HADHAP40939 763 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 CXCR3P49682 368 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 HDAC4P56524 1084 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 CEBPZQ03701 1054 aaKnown RBP5.44□□□□□ -1.54
SYNE2-210ENST00000553455 CCNG2Q16589 344 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 C6orf10Q5SRN2 563 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 HMBOX1Q6NT76 420 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 TTI2Q6NXR4 508 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 NCEH1Q6PIU2 408 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 KLHL24Q6TFL4 600 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 IKBIPQ70UQ0 350 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 TMC8Q8IU68 726 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 CNGA4Q8IV77 575 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 DHX40Q8IX18 779 aaKnown RBP5.44□□□□□ -1.54
SYNE2-210ENST00000553455 ZDHHC23Q8IYP9 409 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 KIAA2013Q8IYS2 634 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 FAM185AQ8N0U4 392 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 NSUN4Q96CB9 384 aaKnown RBP5.44□□□□□ -1.54
SYNE2-210ENST00000553455 PABPC5Q96DU9 382 aaKnown RBP5.44□□□□□ -1.54
SYNE2-210ENST00000553455 NEUROD6Q96NK8 337 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 KRTAP4-5Q9BYR2 181 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 NUF2Q9BZD4 464 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 PRSS22Q9GZN4 317 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 PLEKHA4Q9H4M7 779 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 HCFC1R1Q9NWW0 138 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 MSRB1Q9NZV6 116 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 SEL1LQ9UBV2 794 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 VPS28Q9UK41 221 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 RAP2CQ9Y3L5 183 aa5.44□□□□□ -1.54
SYNE2-210ENST00000553455 FAM237BA0A1B0GVD1 139 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 C17orf102A2RUQ5 167 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 HSPB2A8KAH6 182 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 ZNF814B7Z6K7 855 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 GTPBP1O00178 669 aaKnown RBP5.43□□□□□ -1.54
SYNE2-210ENST00000553455 HSPB6O14558 160 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 ATG13O75143 517 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 CLDN7O95471 211 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 SRD5A1P18405 259 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 NFKBIAP25963 317 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 PTGER1P34995 402 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 KCTD2Q14681 263 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 VEPH1Q14D04 833 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 HSPB2Q16082 182 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 LRRC8EQ6NSJ5 796 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 TMEM71Q6P5X7 295 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 CCDC129Q6ZRS4 1044 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 TBC1D26Q86UD7 250 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 TTC39CQ8N584 583 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 WDTC1Q8N5D0 677 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 FRMD1Q8N878 549 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 SLC44A5Q8NCS7 719 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 MCPH1Q8NEM0 835 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 PSPC1Q8WXF1 523 aaKnown RBP5.43□□□□□ -1.54
SYNE2-210ENST00000553455 WDFY2Q96P53 400 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 MAP7D2Q96T17 732 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 H2AFJQ9BTM1 129 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 B3GNT4Q9C0J1 378 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 MVB12BQ9H7P6 319 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 PRKRIP1Q9H875 184 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-210ENST00000553455 MAP6D1Q9H9H5 199 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 POLR1BQ9H9Y6 1135 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 HAUS2Q9NVX0 235 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 ABI3Q9P2A4 366 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 ZNF70Q9UC06 446 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-210ENST00000553455 LYVE1Q9Y5Y7 322 aa5.43□□□□□ -1.54
SYNE2-210ENST00000553455 A0A096LPK6 155 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 KCNU1A8MYU2 1149 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 AP3D1O14617 1153 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 KIF1CO43896 1103 aaKnown RBP5.42□□□□□ -1.54
SYNE2-210ENST00000553455 TFP02787 698 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 EIF2S1P05198 315 aaKnown RBP5.42□□□□□ -1.54
SYNE2-210ENST00000553455 CELA2AP08217 269 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 CHRNB1P11230 501 aa5.42□□□□□ -1.54
SYNE2-210ENST00000553455 CYP19A1P11511 503 aaPredicted RBP5.42□□□□□ -1.54
SYNE2-210ENST00000553455 ALOX12P18054 663 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms