RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 GLOD4Q9HC38 313 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 PTPRFP10586 1907 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 MBLAC1A4D2B0 266 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 LRRC14BA6NHZ5 514 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 CRCPO75575 148 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 PSEN1P49768 467 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 GPR158Q5T848 1215 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 IRGCQ6NXR0 463 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 PAOXQ6QHF9 649 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 TIFABQ6ZNK6 161 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 CASS4Q9NQ75 786 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 SPATS2LQ9NUQ6 558 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 GMPR2Q9P2T1 348 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 HCSTQ9UBK5 93 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 CDH9Q9ULB4 789 aa13.82□□□□□ -0.2
PRPF40B-209ENST00000548825 SIX3O95343 332 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 HAPLN1P10915 354 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 YWHAQP27348 245 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 CD151P48509 253 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 RAB10P61026 200 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 LIPMQ5VYY2 423 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 PKN3Q6P5Z2 889 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 BNC2Q6ZN30 1099 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 EFHBQ8N7U6 833 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 KATNAL1Q9BW62 490 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 MMADHCQ9H3L0 296 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 RHOJQ9H4E5 214 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 WDR41Q9HAD4 459 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 AURKCQ9UQB9 309 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 TRPV2Q9Y5S1 764 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 RAP1GDS1P52306 607 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 RPS6KA2Q15349 733 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 ALFQ53S48 1182 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 FBXW8Q8N3Y1 598 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 TXNDC5Q8NBS9 432 aaKnown RBP13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 RMDN1Q96DB5 314 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 RPL10LQ96L21 214 aaKnown RBP13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 NCKIPSDQ9NZQ3 722 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 RCOR3Q9P2K3 495 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 UXTQ9UBK9 157 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 AAR2Q9Y312 384 aaKnown RBP13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 DTNAQ9Y4J8 743 aa13.81□□□□□ -0.2
PRPF40B-209ENST00000548825 MAGEA13PA6NCF6 341 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 PPP6CO00743 305 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 MPOP05164 745 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 IRF1P10914 325 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 NPY2RP49146 381 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 COG7P83436 770 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 GK3PQ14409 553 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 PCID2Q5JVF3 399 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 RNF111Q6ZNA4 994 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 AMIGO2Q86SJ2 522 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 MFSD6LQ8IWD5 586 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 SH3RF2Q8TEC5 729 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 HMCESQ96FZ2 354 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 KLHL4Q9C0H6 718 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 PAPOLBQ9NRJ5 636 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 OXSMQ9NWU1 459 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 CLIC5Q9NZA1 410 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 TRHDEQ9UKU6 1024 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 BTRCQ9Y297 605 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 SLC12A8A0AV02 714 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 RBM47A0AV96 593 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 SEC24DO94855 1032 aaPredicted RBP13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 CES1P23141 567 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 CENPLQ8N0S6 344 aaPredicted RBP13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 IFT43Q96FT9 208 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 TBATAQ96M53 351 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 MAF1Q9H063 256 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 hCG_2014768A0A024R1R8 64 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 E9PAM4 449 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 GABRDO14764 452 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 NCAM2O15394 837 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 TADA2AO75478 443 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 ANXA9O76027 345 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 OR6B1O95007 311 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 ASGR1P07306 291 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 THRAP10827 490 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 GFAPP14136 432 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 GALNT2Q10471 571 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 PTK2BQ14289 1009 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 PTPRRQ15256 657 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 INTS6LQ5JSJ4 861 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 SLC30A9Q6PML9 568 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 EPGNQ6UW88 154 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 ANKRD23Q86SG2 305 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 MYLK4Q86YV6 388 aaPredicted RBP13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 CATSPERBQ9H7T0 1116 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 GMIPQ9P107 970 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 SNX13Q9Y5W8 968 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 UNC80Q8N2C7 3258 aa13.8□□□□□ -0.2
PRPF40B-209ENST00000548825 A8MX80 341 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 KIF1CO43896 1103 aaKnown RBP13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 PAMP19021 973 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 UPP1Q16831 310 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 C6orf52Q5T4I8 152 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 MARC1Q5VT66 337 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 TAF2Q6P1X5 1199 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 NUP93Q8N1F7 819 aa13.79□□□□□ -0.2
PRPF40B-209ENST00000548825 EIF2B3Q9NR50 452 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 951 ms