RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 GTF3C6Q969F1 213 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 ATP6V1E2Q96A05 226 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 SLC22A18Q96BI1 424 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 ADAD1Q96M93 576 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 TEFMQ96QE5 360 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 GLIS2Q9BZE0 524 aaPredicted RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 ERVMER34-1Q9H9K5 563 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 RRP7BPQ9NSQ0 103 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 ATP8A2Q9NTI2 1148 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 BABAM1Q9NWV8 329 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 ASIC5Q9NY37 505 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 TFCP2L1Q9NZI6 479 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 EMSYQ7Z589 1322 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 KAT6AQ92794 2004 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 CCDC151A5D8V7 595 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 USP17L23D6RBM5 183 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 TBCAO75347 108 aaKnown RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 FCGR2AP12318 317 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 GABRB1P18505 474 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 EEF1DP29692 281 aaKnown RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 MPLP40238 635 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 GRIA3P42263 894 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 SKIV2L2P42285 1042 aaKnown RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 NRIP1P48552 1158 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 LMAN1P49257 510 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 YWHAZP63104 245 aaKnown RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 TNFAIP1Q13829 316 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 PCLAFQ15004 111 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 RNPS1Q15287 305 aaKnown RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 ANXA2RQ3ZCQ2 193 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 ARL13AQ5H913 290 aaPredicted RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 TCP11X2Q5H9J9 407 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 PCID2Q5JVF3 399 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 C1orf141Q5JVX7 400 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 ERMARDQ5T6L9 678 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 VWA5B1Q5TIE3 1220 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 JADE1Q6IE81 842 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 VSTM1Q6UX27 236 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 Q6ZNX1 250 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 GSTA5Q7RTV2 222 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 KDELC2Q7Z4H8 507 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 DNAAF5Q86Y56 855 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 KLBQ86Z14 1044 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 RFX6Q8HWS3 928 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 C16orf71Q8IYS4 520 aaPredicted RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 TERB1Q8NA31 727 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 GABPB2Q8TAK5 448 aaPredicted RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 CELF1Q92879 486 aaKnown RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 MMABQ96EY8 250 aaPredicted RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 P2RY11Q96G91 374 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 ZNF347Q96SE7 839 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 FIZ1Q96SL8 496 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 NCAPGQ9BPX3 1015 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 DUSP26Q9BV47 211 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 IFT27Q9BW83 186 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 NDST4Q9H3R1 872 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 TAB2Q9NYJ8 693 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 GRHL1Q9NZI5 618 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 DLGAP2Q9P1A6 1054 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 ABI3Q9P2A4 366 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 CPSF2Q9P2I0 782 aaKnown RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 HAO1Q9UJM8 370 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 ICKQ9UPZ9 632 aa4.74□□□□□ -1.65
VPS13A-211ENST00000484581 HEMK1Q9Y5R4 338 aaPredicted RBP4.74□□□□□ -1.65
VPS13A-211ENST00000484581 CBY3A6NI87 242 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 LINC00473A8K010 186 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 A8MXE2 369 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 BTBD18B2RXH4 712 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 CBX6O95503 412 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 AFPP02771 609 aaKnown RBP4.73□□□□□ -1.65
VPS13A-211ENST00000484581 QDPRP09417 244 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 SCG2P13521 617 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 HOXA13P31271 388 aaPredicted RBP4.73□□□□□ -1.65
VPS13A-211ENST00000484581 CDAP32320 146 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 CCT8P50990 548 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 PPP5CP53041 499 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 UBXN2AP68543 259 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 ASTE1Q2TB18 679 aaPredicted RBP4.73□□□□□ -1.65
VPS13A-211ENST00000484581 C5orf22Q49AR2 442 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 HMBOX1Q6NT76 420 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 TMEM65Q6PI78 240 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 TSSK4Q6SA08 328 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 CRELD2Q6UXH1 353 aaPredicted RBP4.73□□□□□ -1.65
VPS13A-211ENST00000484581 RANBP10Q6VN20 620 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 GLDNQ6ZMI3 551 aaPredicted RBP4.73□□□□□ -1.65
VPS13A-211ENST00000484581 MOB3CQ70IA8 216 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 GPAT4Q86UL3 456 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 RHPN2Q8IUC4 686 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 LINC00346Q8IVM7 164 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 AVL9Q8NBF6 648 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 TMEM170AQ8WVE7 144 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 ZFPM2Q8WW38 1151 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 APOL6Q9BWW8 343 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 GATA5Q9BWX5 397 aaPredicted RBP4.73□□□□□ -1.65
VPS13A-211ENST00000484581 MRPL1Q9BYD6 325 aaKnown RBP4.73□□□□□ -1.65
VPS13A-211ENST00000484581 FRMD8Q9BZ67 464 aaPredicted RBP4.73□□□□□ -1.65
VPS13A-211ENST00000484581 NUAK2Q9H093 628 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms