RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 ALG14Q96F25 216 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 SPACA7Q96KW9 195 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 SPATA13Q96N96 652 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 ZNF599Q96NL3 588 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 CIPCQ9C0C6 399 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 ATP13A1Q9HD20 1204 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 PARD6AQ9NPB6 346 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 WHRNQ9P202 907 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 KIAA1522Q9P206 1035 aaPredicted RBP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 KLHL8Q9P2G9 620 aaPredicted RBP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 INTS6Q9UL03 887 aaKnown RBP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 INVSQ9Y283 1065 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 SNX24Q9Y343 169 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 PCDHGA5Q9Y5G8 931 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 OR51B4Q9Y5P0 310 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 SHROOM3Q8TF72 1996 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 EP300Q09472 2414 aaPredicted RBP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 ESYT3A0FGR9 886 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 KCNK1O00180 336 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 SMAPO00193 183 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 DYNC1I1O14576 645 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 DNALI1O14645 258 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-205ENST00000473879 FOXD2O60548 495 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-205ENST00000473879 SEC31AO94979 1220 aaKnown RBP13.47□□□□□ -0.25
BRAT1-205ENST00000473879 ZSCAN5DPP0CG00 497 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 CCNB1P14635 433 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 ETS1P14921 441 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 ITIH2P19823 946 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 PTPN3P26045 913 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 CD70P32970 193 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 RPL22P35268 128 aaKnown RBP13.47□□□□□ -0.25
BRAT1-205ENST00000473879 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-205ENST00000473879 PLK1P53350 603 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 VSNL1P62760 191 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 STARD3Q14849 445 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 BRD3Q15059 726 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 CSRP2Q16527 193 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 MAP7D1Q3KQU3 841 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 FSCBQ5H9T9 825 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 ANKRD20A2Q5SQ80 823 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 ANKRD20A1Q5TYW2 823 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 ANKRD20A3Q5VUR7 823 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 IZUMO3Q5VZ72 239 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 RNF219Q5W0B1 726 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-205ENST00000473879 PMS2CLQ68D20 193 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 MBLAC2Q68D91 279 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 ARHGAP36Q6ZRI8 547 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 BBS5Q8N3I7 341 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 GLIS1Q8NBF1 620 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 LRRN4Q8WUT4 740 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 CASKIN2Q8WXE0 1202 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 RLN3Q8WXF3 142 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 SORCS1Q8WY21 1168 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 IFT81Q8WYA0 676 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 TTC17Q96AE7 1141 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 MYO19Q96H55 970 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 SEMA4GQ9NTN9 838 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 PLA2G4CQ9UP65 541 aa13.47□□□□□ -0.25
BRAT1-205ENST00000473879 PTPRZ1P23471 2315 aaPredicted RBP13.46□□□□□ -0.25
BRAT1-205ENST00000473879 RALGAPA1Q6GYQ0 2036 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 CCDC151A5D8V7 595 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 KDELR3O43731 214 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 SYNCRIPO60506 623 aaKnown RBP13.46□□□□□ -0.25
BRAT1-205ENST00000473879 PRAMEF11O60813 436 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 ZNF217O75362 1048 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 ATP5BP06576 529 aaKnown RBP13.46□□□□□ -0.25
BRAT1-205ENST00000473879 DLDP09622 509 aaKnown RBP13.46□□□□□ -0.25
BRAT1-205ENST00000473879 NDUFV2P19404 249 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 BCKDHBP21953 392 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 ACVRL1P37023 503 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 FDFT1P37268 417 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 RENBPP51606 427 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 GEMIN4P57678 1058 aaKnown RBP13.46□□□□□ -0.25
BRAT1-205ENST00000473879 BASP1P80723 227 aaKnown RBP13.46□□□□□ -0.25
BRAT1-205ENST00000473879 WASHC5Q12768 1159 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 LMAN2Q12907 356 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 HNRNPDQ14103 355 aaKnown RBP13.46□□□□□ -0.25
BRAT1-205ENST00000473879 RFTN1Q14699 578 aaPredicted RBP13.46□□□□□ -0.25
BRAT1-205ENST00000473879 PTPRNQ16849 979 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 FUT11Q495W5 492 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 TEX44Q53QW1 395 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 SPDYCQ5MJ68 293 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 PLA2G2CQ5R387 149 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 TMCO4Q5TGY1 634 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 METTL3Q86U44 580 aaKnown RBP13.46□□□□□ -0.25
BRAT1-205ENST00000473879 HOOK3Q86VS8 718 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 ZNF567Q8N184 647 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 DCAF4L2Q8NA75 395 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 OR7D4Q8NG98 312 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 OR52K2Q8NGK3 314 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 CCDC110Q8TBZ0 833 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 MAML1Q92585 1016 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 MRGPRX1Q96LB2 322 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 PPP1R2P1Q96PQ5 205 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 IL12RB2Q99665 862 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 SPON2Q9BUD6 331 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 C2orf49Q9BVC5 232 aaPredicted RBP13.46□□□□□ -0.25
BRAT1-205ENST00000473879 ACE2Q9BYF1 805 aaPredicted RBP13.46□□□□□ -0.25
BRAT1-205ENST00000473879 ARRDC1-AS1Q9H2J1 176 aa13.46□□□□□ -0.25
BRAT1-205ENST00000473879 TMEM245Q9H330 911 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms