RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 LMX1AQ8TE12 382 aa13.47□□□□□ -0.25
CPSF4-210ENST00000469897 ASB12Q8WXK4 309 aa13.47□□□□□ -0.25
CPSF4-210ENST00000469897 FGF11Q92914 225 aa13.47□□□□□ -0.25
CPSF4-210ENST00000469897 CENPTQ96BT3 561 aa13.47□□□□□ -0.25
CPSF4-210ENST00000469897 TTYH3Q9C0H2 523 aa13.47□□□□□ -0.25
CPSF4-210ENST00000469897 FZD10Q9ULW2 581 aa13.47□□□□□ -0.25
CPSF4-210ENST00000469897 DAAM1Q9Y4D1 1078 aa13.47□□□□□ -0.25
CPSF4-210ENST00000469897 PCDHB1Q9Y5F3 818 aa13.47□□□□□ -0.25
CPSF4-210ENST00000469897 U3KQA8 63 aa13.47□□□□□ -0.25
CPSF4-210ENST00000469897 KNL1Q8NG31 2342 aa13.47□□□□□ -0.25
CPSF4-210ENST00000469897 TCRBV5S1A1TA0A578 114 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 CPED1A4D0V7 1026 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 ANKRD62A6NC57 917 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 LGALS16A8MUM7 142 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 RASA4BC9J798 803 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 AREL1O15033 823 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 INSIG1O15503 277 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 RASA4O43374 803 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 TMCC1O94876 653 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 NME1P15531 152 aaKnown RBP13.46□□□□□ -0.25
CPSF4-210ENST00000469897 JUNDP17535 347 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 DUSP3P51452 185 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-210ENST00000469897 ZNF143P52747 638 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-210ENST00000469897 GSCP56915 257 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-210ENST00000469897 MYL5Q02045 173 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 RAD51Q06609 339 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 C1QBPQ07021 282 aaKnown RBP13.46□□□□□ -0.25
CPSF4-210ENST00000469897 EIF2B5Q13144 721 aaKnown RBP13.46□□□□□ -0.25
CPSF4-210ENST00000469897 C1orf61Q13536 156 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 CYTH1Q15438 398 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 EFHC2Q5JST6 749 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 CDCP2Q5VXM1 449 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 ACAD10Q6JQN1 1059 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 DNAJC24Q6P3W2 148 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 MON1BQ7L1V2 547 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 VPS36Q86VN1 386 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 ZSCAN30Q86W11 494 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 PARGQ86W56 976 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 RTL3Q8N8U3 475 aaKnown RBP13.46□□□□□ -0.25
CPSF4-210ENST00000469897 FAM181AQ8N9Y4 354 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 ANKRD20A12PQ8NF67 263 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 BAP1Q92560 729 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 HMCESQ96FZ2 354 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 MCEEQ96PE7 176 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 DUSP23Q9BVJ7 150 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 OSBPL1AQ9BXW6 950 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 TCEAL2Q9H3H9 227 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-210ENST00000469897 MBNL1Q9NR56 388 aaKnown RBP13.46□□□□□ -0.25
CPSF4-210ENST00000469897 ANO10Q9NW15 660 aa13.46□□□□□ -0.25
CPSF4-210ENST00000469897 ITPR1Q14643 2758 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 ZFYVE26Q68DK2 2539 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 TMEM131Q92545 1883 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 ZSCAN5CA6NGD5 496 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-210ENST00000469897 H3BM21 787 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 AQP9O43315 295 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 MPOP05164 745 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 ACTN2P35609 894 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 ADKP55263 362 aaKnown RBP13.45□□□□□ -0.26
CPSF4-210ENST00000469897 YBEYP58557 167 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-210ENST00000469897 RHOAP61586 193 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 CCDC173Q0VFZ6 552 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 NCAPHQ15003 741 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 ACAP1Q15027 740 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 CDKN3Q16667 212 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 DEFB133Q30KQ1 61 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 INO80DQ53TQ3 878 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-210ENST00000469897 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 DCUN1D2Q6PH85 259 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 APTXQ7Z2E3 356 aaKnown RBP13.45□□□□□ -0.26
CPSF4-210ENST00000469897 IRF2BP2Q7Z5L9 587 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 MCOLN2Q8IZK6 566 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 RBFAQ8N0V3 343 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 IFI44Q8TCB0 444 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 CASKIN2Q8WXE0 1202 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 ARHGEF26Q96DR7 871 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 GDAP1L1Q96MZ0 367 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 ERGIC2Q96RQ1 377 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 CNPY3Q9BT09 278 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 WRAP53Q9BUR4 548 aaKnown RBP13.45□□□□□ -0.26
CPSF4-210ENST00000469897 PNMA8BQ9ULN7 279 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-210ENST00000469897 MFHAS1Q9Y4C4 1052 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 CSNK1G3Q9Y6M4 447 aa13.45□□□□□ -0.26
CPSF4-210ENST00000469897 COL5A1P20908 1838 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-210ENST00000469897 EIF4E1BA6NMX2 242 aaKnown RBP13.44□□□□□ -0.26
CPSF4-210ENST00000469897 TMCO5BA8MYB1 307 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 USP12O75317 370 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 GCATO75600 419 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 TM7SF2O76062 418 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 IGSF6O95976 241 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 GP1BAP07359 652 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 TNFAIP3P21580 790 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 TGM2P21980 687 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 EIF4A3P38919 411 aaKnown RBP13.44□□□□□ -0.26
CPSF4-210ENST00000469897 THOP1P52888 689 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 OGDHQ02218 1023 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 SERINC3Q13530 473 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 PTK2BQ14289 1009 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 KLHL40Q2TBA0 621 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 TBC1D25Q3MII6 688 aa13.44□□□□□ -0.26
CPSF4-210ENST00000469897 FAXCQ5TGI0 409 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms