RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GOLPH3Q9H4A6 298 aa13.08□□□□□ -0.32
COL5A1-206ENST00000465877 EBF2Q9HAK2 575 aa13.08□□□□□ -0.32
COL5A1-206ENST00000465877 REXO2Q9Y3B8 237 aaKnown RBP13.08□□□□□ -0.32
COL5A1-206ENST00000465877 HYOU1Q9Y4L1 999 aa13.08□□□□□ -0.32
COL5A1-206ENST00000465877 LRP4O75096 1905 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 RCCD1A6NED2 376 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 C16orf96A6NNT2 1141 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 ZNF487B1APH4 448 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 INSIG1O15503 277 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 SPINT1O43278 529 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 PSTPIP1O43586 416 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 BUB1BO60566 1050 aaPredicted RBP13.07□□□□□ -0.32
COL5A1-206ENST00000465877 MAFKO60675 156 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 RNGTTO60942 597 aaKnown RBP13.07□□□□□ -0.32
COL5A1-206ENST00000465877 MAP3K6O95382 1288 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 POP4O95707 220 aaKnown RBP13.07□□□□□ -0.32
COL5A1-206ENST00000465877 KDELR1P24390 212 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 MAT2AP31153 395 aaKnown RBP13.07□□□□□ -0.32
COL5A1-206ENST00000465877 SLC1A1P43005 524 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 NOP2P46087 812 aaKnown RBP13.07□□□□□ -0.32
COL5A1-206ENST00000465877 RACK1P63244 317 aaKnown RBP13.07□□□□□ -0.32
COL5A1-206ENST00000465877 ZNF235Q14590 738 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 LBRQ14739 615 aaKnown RBP13.07□□□□□ -0.32
COL5A1-206ENST00000465877 TEAD4Q15561 434 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 SETMARQ53H47 684 aaPredicted RBP13.07□□□□□ -0.32
COL5A1-206ENST00000465877 ZNF805Q5CZA5 627 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 NAPEPLDQ6IQ20 393 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 C11orf63Q6NUN7 778 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 FBXL19Q6PCT2 694 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 GDPD4Q6W3E5 623 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 ADAT2Q7Z6V5 191 aaKnown RBP13.07□□□□□ -0.32
COL5A1-206ENST00000465877 RHOT1Q8IXI2 618 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 TSEN2Q8NCE0 465 aaKnown RBP13.07□□□□□ -0.32
COL5A1-206ENST00000465877 OR2I1PQ8NGU4 316 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 RAPGEF5Q92565 580 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 KLHL32Q96NJ5 620 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 ZDHHC5Q9C0B5 715 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 SEPT3Q9UH03 358 aa13.07□□□□□ -0.32
COL5A1-206ENST00000465877 A0A1B0GVT2 93 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 A0A1W2PQU0 124 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 MUSKO15146 869 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 AP1G1O43747 822 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 PCDH8O95206 1070 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 PEX11BO96011 259 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 TNNT1P13805 278 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 COMTP21964 271 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 NUDT1P36639 197 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 GARSP41250 739 aaKnown RBP13.06□□□□□ -0.32
COL5A1-206ENST00000465877 CSNK1EP49674 416 aaKnown RBP13.06□□□□□ -0.32
COL5A1-206ENST00000465877 VAV2P52735 878 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 BNC1Q01954 994 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 SLC10A7Q0GE19 358 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 GALNT2Q10471 571 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 GRM3Q14832 879 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 UAP1L1Q3KQV9 507 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 LRRC73Q5JTD7 316 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 LRRC38Q5VT99 294 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 KIAA1161Q6NSJ0 714 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 NEK5Q6P3R8 708 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 DGLUCYQ7Z3D6 616 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 PRPF39Q86UA1 669 aaKnown RBP13.06□□□□□ -0.32
COL5A1-206ENST00000465877 VSIG1Q86XK7 387 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 PQLC3Q8N755 202 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 RAB7BQ96AH8 199 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 SERAC1Q96JX3 654 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 PSKH2Q96QS6 385 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 CPEB1Q9BZB8 566 aaKnown RBP13.06□□□□□ -0.32
COL5A1-206ENST00000465877 AASDHPPTQ9NRN7 309 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 DDX56Q9NY93 547 aaKnown RBP13.06□□□□□ -0.32
COL5A1-206ENST00000465877 GGT7Q9UJ14 662 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 SALL4Q9UJQ4 1053 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 ZFR2Q9UPR6 939 aaKnown RBP13.06□□□□□ -0.32
COL5A1-206ENST00000465877 DMTF1Q9Y222 760 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 ITM2BQ9Y287 266 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 FADS3Q9Y5Q0 445 aa13.06□□□□□ -0.32
COL5A1-206ENST00000465877 CNOT1A5YKK6 2376 aaKnown RBP13.05□□□□□ -0.32
COL5A1-206ENST00000465877 COL5A1P20908 1838 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-206ENST00000465877 TSPAN11A1L157 253 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 DCDC2BA2VCK2 349 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 C3orf70A6NLC5 250 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-206ENST00000465877 OPHN1O60890 802 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 GJB3O75712 270 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 CER1O95813 267 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 PRLRP16471 622 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 SERPINA4P29622 427 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 HSPA9P38646 679 aaKnown RBP13.05□□□□□ -0.32
COL5A1-206ENST00000465877 CSNK1DP48730 415 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 GBE1Q04446 702 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 ZNF284Q2VY69 593 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 TMEM259Q4ZIN3 620 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 ODF2Q5BJF6 829 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 CFAP58Q5T655 872 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 SEL1L3Q68CR1 1132 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 IL27RAQ6UWB1 636 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 SRLQ86TD4 932 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 HORMAD1Q86X24 394 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 PLD5Q8N7P1 536 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-206ENST00000465877 RNF157Q96PX1 679 aa13.05□□□□□ -0.32
COL5A1-206ENST00000465877 TUBGCP5Q96RT8 1024 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms