RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	CNTN1	Q12860	1018 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	PROSER1	Q86XN7	944 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	PSTK	Q8IV42	348 aa	Known RBP	12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	KCTD6	Q8NC69	237 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	PIP4K2C	Q8TBX8	421 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	SAP25	Q8TEE9	199 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	HMCES	Q96FZ2	354 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	ERVMER34-1	Q9H9K5	563 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	SP110	Q9HB58	689 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	DYRK4	Q9NR20	520 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	TFR2	Q9UP52	801 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	DMTF1	Q9Y222	760 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	HYOU1	Q9Y4L1	999 aa		12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	GOLGA4	Q13439	2230 aa	Known RBP	12.93	□□□□□ -0.34
FDPS-204	ENST00000461507	GOLGA6L3	A6NEY3	463 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	ARHGAP42	A6NI28	874 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	PLK4	O00444	970 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	KPNA3	O00505	521 aa	Predicted RBP	12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	KCNK3	O14649	394 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	SMAD6	O43541	496 aa	Known RBP	12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	NDUFA10	O95299	355 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	KRT1	P04264	644 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	CTSL	P07711	333 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	KRT7	P08729	469 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	AMPD1	P23109	780 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	EPHA8	P29322	1005 aa	Predicted RBP	12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	RXRG	P48443	463 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	TAS2R38	P59533	333 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	ARF5	P84085	180 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	OVGP1	Q12889	678 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	PARP15	Q460N3	678 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	SLC45A4	Q5BKX6	768 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	PIP5KL1	Q5T9C9	394 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	TMCO3	Q6UWJ1	677 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	KANSL1	Q7Z3B3	1105 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	OXR1	Q8N573	874 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	PAF1	Q8N7H5	531 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	MFSD2A	Q8NA29	543 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	ACRBP	Q8NEB7	543 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	TMIE	Q8NEW7	156 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	OR2A12	Q8NGT7	310 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	OR6K2	Q8NGY2	324 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	TEKT4	Q8WW24	435 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	SERAC1	Q96JX3	654 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	RETREG1	Q9H6L5	497 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	ZDHHC6	Q9H6R6	413 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	PCDH18	Q9HCL0	1135 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	PREB	Q9HCU5	417 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	GDF3	Q9NR23	364 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	AASDHPPT	Q9NRN7	309 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	CWC15	Q9P013	229 aa	Known RBP	12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	DKK4	Q9UBT3	224 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	INTU	Q9ULD6	942 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	KNTC1	P50748	2209 aa		12.92	□□□□□ -0.34
FDPS-204	ENST00000461507	LRRD1	A4D1F6	860 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	WASH4P	A8MWX3	477 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	TLR4	O00206	839 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	TAF4	O00268	1085 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	ZMPSTE24	O75844	475 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	ZNF135	P52742	658 aa	Predicted RBP	12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	YBEY	P58557	167 aa	Predicted RBP	12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	TAS2R40	P59535	323 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	RHOA	P61586	193 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	MMRN1	Q13201	1228 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	SMAD1	Q15797	465 aa	Known RBP	12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	DPYSL2	Q16555	572 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	ATP13A4	Q4VNC1	1196 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	NEK5	Q6P3R8	708 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	RAD9B	Q6WBX8	426 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	PRPF39	Q86UA1	669 aa	Known RBP	12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	MAP7D3	Q8IWC1	876 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	TMEM145	Q8NBT3	493 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	CSPG4P5	Q96PW8	444 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	DESI2	Q9BSY9	194 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	CEP44	Q9C0F1	390 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	SLC39A8	Q9C0K1	460 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	UBA2	Q9UBT2	640 aa	Predicted RBP	12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	FTSJ1	Q9UET6	329 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	PCDHGA1	Q9Y5H4	931 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	DMXL2	Q8TDJ6	3036 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	CACNA1G	O43497	2377 aa		12.91	□□□□□ -0.34
FDPS-204	ENST00000461507	TRPM6	Q9BX84	2022 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	TBC1D3D	A0A087WVF3	549 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	TBC1D3I	A0A087WXS9	549 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	TBC1D3E	A0A087X179	549 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	TBC1D3K	A0A087X1G2	549 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	TBC1D3F	A6NER0	549 aa	Predicted RBP	12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	TBC1D3L	B9A6J9	549 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	KDELR3	O43731	214 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	RNGTT	O60942	597 aa	Known RBP	12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	ZNF821	O75541	412 aa	Predicted RBP	12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	TMCC1	O94876	653 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	PRNP	P04156	253 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	CD48	P09326	243 aa		12.9	□□□□□ -0.34
FDPS-204	ENST00000461507	TBC1D3H	P0C7X1	549 aa		12.9	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 83 ms