RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 SKIV2L2P42285 1042 aaKnown RBP5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 GPD2P43304 727 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 CDH15P55291 814 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 SSBP2P81877 361 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 ID2Q02363 134 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 EPS8Q12929 822 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 FBXO43Q4G163 708 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 HECTD3Q5T447 861 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 TMEM268Q5VZI3 342 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 SLC2A7Q6PXP3 512 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 PRPF39Q86UA1 669 aaKnown RBP5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 VSIG1Q86XK7 387 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 CREBRFQ8IUR6 639 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 TAGAPQ8N103 731 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 C17orf53Q8N3J3 647 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 ZNF366Q8N895 744 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 RFWD2Q8NHY2 731 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 CNOT9Q92600 299 aaKnown RBP5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 CNDP2Q96KP4 475 aaKnown RBP5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 PIP5K1AQ99755 562 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 LBHD1Q9BQE6 289 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 PCDHB16Q9NRJ7 776 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 HCFC1R1Q9NWW0 138 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 PPP1R14DQ9NXH3 145 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 NLKQ9UBE8 527 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 CORO1CQ9ULV4 474 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 ICKQ9UPZ9 632 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 DHDHQ9UQ10 334 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 LYVE1Q9Y5Y7 322 aa5.34□□□□□ -1.55
HMGB1P26-201ENST00000452520 GOLGA6L10A0A0M3HER8 536 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 TEX22C9J3V5 150 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 HBP1O60381 514 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 DDAH2O95865 285 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 SPARCP09486 303 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 CD72P21854 359 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 OAS2P29728 719 aaKnown RBP5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 ICAM3P32942 547 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 PSMB10P40306 273 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 DPP6P42658 865 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 PTPN9P43378 593 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 PMPCAQ10713 525 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 STK4Q13043 487 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 TRIP6Q15654 476 aaKnown RBP5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 CDC37Q16543 378 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 SRSF7Q16629 238 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 ZNF766Q5HY98 468 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 MTX3Q5HYI7 312 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 PIK3CD-AS1Q5SR53 167 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 TTC39AQ5SRH9 613 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 ZKSCAN2Q63HK3 967 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 AAGABQ6PD74 315 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 IGFN1Q86VF2 1251 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 MON1AQ86VX9 555 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 CCDC25Q86WR0 208 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 GALNT13Q8IUC8 556 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 DDIASQ8IXT1 998 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 WDTC1Q8N5D0 677 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 PRSS3P2Q8NHM4 247 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 RAB40AQ8WXH6 277 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 HSPH1Q92598 858 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 FRG2BQ96QU4 278 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 EYA3Q99504 573 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 SIL1Q9H173 461 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 AAMDCQ9H7C9 122 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 SPAG4Q9NPE6 437 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 NRIP3Q9NQ35 241 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 KCND2Q9NZV8 630 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 ZNF112Q9UJU3 913 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 CLDN16Q9Y5I7 305 aa5.33□□□□□ -1.56
HMGB1P26-201ENST00000452520 GAGE10A6NGK3 116 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 ADAM10O14672 748 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 PER2O15055 1255 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 CNOT3O75175 753 aaKnown RBP5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 CBX6O95503 412 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 TGFB3P10600 412 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 NFKBIAP25963 317 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 SLC16A2P36021 539 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 GARSP41250 739 aaKnown RBP5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 C21orf58P58505 322 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 MED22Q15528 200 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 TMEM266Q2M3C6 531 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 NAA16Q6N069 864 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 DPY19L2P1Q6NXN4 242 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 FAM47EQ6ZV65 393 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 KCTD6Q8NC69 237 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 TNIP2Q8NFZ5 429 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 SCFD2Q8WU76 684 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 HDAC7Q8WUI4 952 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 FAR1Q8WVX9 515 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 EME1Q96AY2 570 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 COQ8BQ96D53 544 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 MSI2Q96DH6 328 aaKnown RBP5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 TEFMQ96QE5 360 aaKnown RBP5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 IFT27Q9BW83 186 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 EPHX3Q9H6B9 360 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 ACTR5Q9H9F9 607 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 CCDC177Q9NQR7 707 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 THSD1Q9NS62 852 aa5.32□□□□□ -1.56
HMGB1P26-201ENST00000452520 HCN3Q9P1Z3 774 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms