RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 LAMA5O15230 3695 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 A0A087WV48 116 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 SPTY2D1-AS1A0A0U1RR47 76 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 TCRBV5S1A1TA0A578 114 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 H3BM21 787 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 IGSF6O95976 241 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 AIF1P55008 147 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 YBEYP58557 167 aaPredicted RBP21.34■■□□□ 1.01
VSX1-206ENST00000444511 RHOAP61586 193 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 RPL7AP62424 266 aaKnown RBP21.34■■□□□ 1.01
VSX1-206ENST00000444511 PDE1CQ14123 709 aaPredicted RBP21.34■■□□□ 1.01
VSX1-206ENST00000444511 FZD2Q14332 565 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 NCAPHQ15003 741 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 APTXQ7Z2E3 356 aaKnown RBP21.34■■□□□ 1.01
VSX1-206ENST00000444511 TTC7BQ86TV6 843 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 PARGQ86W56 976 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 CACTIN-AS1Q8N1I8 211 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 ASB12Q8WXK4 309 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 KLF6Q99612 283 aaPredicted RBP21.34■■□□□ 1.01
VSX1-206ENST00000444511 TTYH3Q9C0H2 523 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 NOL6Q9H6R4 1146 aaKnown RBP21.34■■□□□ 1.01
VSX1-206ENST00000444511 CATSPERBQ9H7T0 1116 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 FZD10Q9ULW2 581 aa21.34■■□□□ 1.01
VSX1-206ENST00000444511 SCAMP1O15126 338 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 CSF2P04141 144 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 GIMD1P0DJR0 217 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 CKMT1AP12532 417 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 RTP5Q14D33 572 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 PARP15Q460N3 678 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 INO80DQ53TQ3 878 aaPredicted RBP21.33■■□□□ 1.01
VSX1-206ENST00000444511 CCDC183Q5T5S1 534 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 ACAD10Q6JQN1 1059 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 MCOLN2Q8IZK6 566 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 AOPEPQ8N6M6 819 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 DCBLD1Q8N8Z6 715 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 DENND6BQ8NEG7 585 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 HMCESQ96FZ2 354 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 APOLD1Q96LR9 279 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 DUSP23Q9BVJ7 150 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 HSD3B7Q9H2F3 369 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 EVA1BQ9NVM1 165 aa21.33■■□□□ 1.01
VSX1-206ENST00000444511 RASA4BC9J798 803 aa21.32■■□□□ 1
VSX1-206ENST00000444511 K7ESM1 405 aa21.32■■□□□ 1
VSX1-206ENST00000444511 RASA4O43374 803 aa21.32■■□□□ 1
VSX1-206ENST00000444511 NEBLO76041 1014 aa21.32■■□□□ 1
VSX1-206ENST00000444511 MBD3O95983 291 aa21.32■■□□□ 1
VSX1-206ENST00000444511 MT-CO3P00414 261 aa21.32■■□□□ 1
VSX1-206ENST00000444511 ATP1A3P13637 1013 aa21.32■■□□□ 1
VSX1-206ENST00000444511 NME1P15531 152 aaKnown RBP21.32■■□□□ 1
VSX1-206ENST00000444511 DUSP3P51452 185 aaPredicted RBP21.32■■□□□ 1
VSX1-206ENST00000444511 LRRC73Q5JTD7 316 aa21.32■■□□□ 1
VSX1-206ENST00000444511 PPP1R15BQ5SWA1 713 aa21.32■■□□□ 1
VSX1-206ENST00000444511 KDM7AQ6ZMT4 941 aa21.32■■□□□ 1
VSX1-206ENST00000444511 ZNF548Q8NEK5 533 aaPredicted RBP21.32■■□□□ 1
VSX1-206ENST00000444511 VOPP1Q96AW1 172 aa21.32■■□□□ 1
VSX1-206ENST00000444511 KLC2Q9H0B6 622 aa21.32■■□□□ 1
VSX1-206ENST00000444511 ITPR1Q14643 2758 aa21.31■■□□□ 1
VSX1-206ENST00000444511 WASH4PA8MWX3 477 aa21.31■■□□□ 1
VSX1-206ENST00000444511 AREL1O15033 823 aa21.31■■□□□ 1
VSX1-206ENST00000444511 FGF10O15520 208 aaPredicted RBP21.31■■□□□ 1
VSX1-206ENST00000444511 SPINT1O43278 529 aa21.31■■□□□ 1
VSX1-206ENST00000444511 TNFAIP3P21580 790 aa21.31■■□□□ 1
VSX1-206ENST00000444511 ABCG1P45844 678 aa21.31■■□□□ 1
VSX1-206ENST00000444511 SERINC3Q13530 473 aa21.31■■□□□ 1
VSX1-206ENST00000444511 PPP1R2P3Q6NXS1 205 aa21.31■■□□□ 1
VSX1-206ENST00000444511 UMODL1-AS1Q8N2C9 162 aa21.31■■□□□ 1
VSX1-206ENST00000444511 FAM181AQ8N9Y4 354 aa21.31■■□□□ 1
VSX1-206ENST00000444511 NETO2Q8NC67 525 aa21.31■■□□□ 1
VSX1-206ENST00000444511 CXorf40AQ8TE69 158 aa21.31■■□□□ 1
VSX1-206ENST00000444511 BAP1Q92560 729 aa21.31■■□□□ 1
VSX1-206ENST00000444511 NCAPGQ9BPX3 1015 aa21.31■■□□□ 1
VSX1-206ENST00000444511 C1QTNF7Q9BXJ2 289 aa21.31■■□□□ 1
VSX1-206ENST00000444511 NAT10Q9H0A0 1025 aaKnown RBP21.31■■□□□ 1
VSX1-206ENST00000444511 USP29Q9HBJ7 922 aa21.31■■□□□ 1
VSX1-206ENST00000444511 MFHAS1Q9Y4C4 1052 aa21.31■■□□□ 1
VSX1-206ENST00000444511 TRPM6Q9BX84 2022 aa21.31■■□□□ 1
VSX1-206ENST00000444511 ARID1BQ8NFD5 2236 aaPredicted RBP21.31■■□□□ 1
VSX1-206ENST00000444511 CELSR3Q9NYQ7 3312 aa21.3■■□□□ 1
VSX1-206ENST00000444511 MMP20O60882 483 aa21.3■■□□□ 1
VSX1-206ENST00000444511 MYF5P13349 255 aa21.3■■□□□ 1
VSX1-206ENST00000444511 JUNDP17535 347 aa21.3■■□□□ 1
VSX1-206ENST00000444511 XPAP23025 273 aaPredicted RBP21.3■■□□□ 1
VSX1-206ENST00000444511 THOP1P52888 689 aa21.3■■□□□ 1
VSX1-206ENST00000444511 TPI1P60174 286 aa21.3■■□□□ 1
VSX1-206ENST00000444511 PFN3P60673 137 aa21.3■■□□□ 1
VSX1-206ENST00000444511 TYRO3Q06418 890 aa21.3■■□□□ 1
VSX1-206ENST00000444511 IRF2BP2Q7Z5L9 587 aa21.3■■□□□ 1
VSX1-206ENST00000444511 VPS36Q86VN1 386 aa21.3■■□□□ 1
VSX1-206ENST00000444511 DONSONQ9NYP3 566 aa21.3■■□□□ 1
VSX1-206ENST00000444511 DKK3Q9UBP4 350 aa21.3■■□□□ 1
VSX1-206ENST00000444511 MYO6Q9UM54 1294 aa21.3■■□□□ 1
VSX1-206ENST00000444511 CSNK1G3Q9Y6M4 447 aa21.3■■□□□ 1
VSX1-206ENST00000444511 URB1O60287 2271 aaKnown RBP21.29■■□□□ 1
VSX1-206ENST00000444511 CHD5Q8TDI0 1954 aa21.29■■□□□ 1
VSX1-206ENST00000444511 TMCO5BA8MYB1 307 aa21.29■■□□□ 1
VSX1-206ENST00000444511 AQP9O43315 295 aa21.29■■□□□ 1
VSX1-206ENST00000444511 TLX3O43711 291 aaPredicted RBP21.29■■□□□ 1
VSX1-206ENST00000444511 OPA1O60313 960 aa21.29■■□□□ 1
VSX1-206ENST00000444511 TM7SF2O76062 418 aa21.29■■□□□ 1
VSX1-206ENST00000444511 GP1BAP07359 652 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms