RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 TTC17Q96AE7 1141 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 RSPRY1Q96DX4 576 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 SERAC1Q96JX3 654 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 KIFC1Q9BW19 673 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 CNOT10Q9H9A5 744 aaKnown RBP22.34■■□□□ 1.17
VSX1-205ENST00000429762 SFXN1Q9H9B4 322 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 SCUBE2Q9NQ36 999 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 PSD3Q9NYI0 1048 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 FAM169AQ9Y6X4 670 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 TRIM49D1C9J1S8 452 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 MGAT5Q09328 741 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 RFTN1Q14699 578 aaPredicted RBP22.34■■□□□ 1.17
VSX1-205ENST00000429762 ATXN7L2Q5T6C5 722 aaPredicted RBP22.34■■□□□ 1.17
VSX1-205ENST00000429762 ASTLQ6HA08 431 aaPredicted RBP22.34■■□□□ 1.17
VSX1-205ENST00000429762 PKN3Q6P5Z2 889 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 DCAF4L2Q8NA75 395 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 IFT43Q96FT9 208 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 AGAP2Q99490 1192 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 C20orf96Q9NUD7 363 aaPredicted RBP22.34■■□□□ 1.17
VSX1-205ENST00000429762 ABCB8Q9NUT2 735 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 LHX3Q9UBR4 397 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 INTS6Q9UL03 887 aaKnown RBP22.34■■□□□ 1.17
VSX1-205ENST00000429762 TCAF1Q9Y4C2 921 aa22.34■■□□□ 1.17
VSX1-205ENST00000429762 IQANK1A0A1B0GTG1 560 aa22.33■■□□□ 1.17
VSX1-205ENST00000429762 AP3B1O00203 1094 aa22.33■■□□□ 1.17
VSX1-205ENST00000429762 POU2F2P09086 479 aa22.33■■□□□ 1.17
VSX1-205ENST00000429762 KRT4P19013 534 aa22.33■■□□□ 1.17
VSX1-205ENST00000429762 VIPR2P41587 438 aa22.33■■□□□ 1.17
VSX1-205ENST00000429762 NR1H3Q13133 447 aa22.33■■□□□ 1.17
VSX1-205ENST00000429762 ALG1LQ6GMV1 187 aa22.33■■□□□ 1.17
VSX1-205ENST00000429762 ESRP1Q6NXG1 681 aaKnown RBP22.33■■□□□ 1.17
VSX1-205ENST00000429762 MARK2Q7KZI7 788 aaKnown RBP22.33■■□□□ 1.17
VSX1-205ENST00000429762 CCDC117Q8IWD4 279 aaPredicted RBP22.33■■□□□ 1.17
VSX1-205ENST00000429762 FIBINQ8TAL6 211 aa22.33■■□□□ 1.17
VSX1-205ENST00000429762 INSIG1O15503 277 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 SMAD6O43541 496 aaKnown RBP22.32■■□□□ 1.16
VSX1-205ENST00000429762 GLP2RO95838 553 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 SERPINF2P08697 491 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 PIRTP0C851 137 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 CR2P20023 1033 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 CTSOP43234 321 aaPredicted RBP22.32■■□□□ 1.16
VSX1-205ENST00000429762 SERPINH1P50454 418 aaKnown RBP22.32■■□□□ 1.16
VSX1-205ENST00000429762 HSP90AA5PQ58FG0 334 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 MPP7Q5T2T1 576 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 SMIM14Q96QK8 99 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 SMC6Q96SB8 1091 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 BBS2Q9BXC9 721 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 ZFATQ9P243 1243 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 CHKBQ9Y259 395 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 LOC285095A0A1B0GVY8 99 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 MAGEB16A2A368 324 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 MT-ND3P03897 115 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 LSP1P33241 339 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 ABCG1P45844 678 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 CDK18Q07002 472 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 LY6G5CQ5SRR4 150 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 MROH9Q5TGP6 573 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 PACS1Q6VY07 963 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 KCNMB4Q86W47 210 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 TIFAQ96CG3 184 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 TM6SF2Q9BZW4 377 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 C12orf65Q9H3J6 166 aaKnown RBP22.32■■□□□ 1.16
VSX1-205ENST00000429762 IARS2Q9NSE4 1012 aaKnown RBP22.32■■□□□ 1.16
VSX1-205ENST00000429762 INTS9Q9NV88 658 aaKnown RBP22.32■■□□□ 1.16
VSX1-205ENST00000429762 KIAA1522Q9P206 1035 aaPredicted RBP22.32■■□□□ 1.16
VSX1-205ENST00000429762 ACTL7BQ9Y614 415 aa22.32■■□□□ 1.16
VSX1-205ENST00000429762 HMX2A2RU54 273 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 HLA-FP30511 346 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 RHOAP61586 193 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 MSLNQ13421 630 aaPredicted RBP22.31■■□□□ 1.16
VSX1-205ENST00000429762 PLEKHG6Q3KR16 790 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 TRIM68Q6AZZ1 485 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 CYS1Q717R9 158 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 GET4Q7L5D6 327 aaPredicted RBP22.31■■□□□ 1.16
VSX1-205ENST00000429762 OR6K2Q8NGY2 324 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 GDAP1Q8TB36 358 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 ATXN2LQ8WWM7 1075 aaKnown RBP22.31■■□□□ 1.16
VSX1-205ENST00000429762 CDKL2Q92772 493 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 IRF7Q92985 503 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 MRPL38Q96DV4 380 aaKnown RBP22.31■■□□□ 1.16
VSX1-205ENST00000429762 FEM1CQ96JP0 617 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 LMLNQ96KR4 655 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 ARNT2Q9HBZ2 717 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 SPHK2Q9NRA0 654 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 ZNF180Q9UJW8 692 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 KCTD3Q9Y597 815 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 PCDHGC4Q9Y5F7 938 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 C5orf42Q9H799 3197 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 ANKRD36A6QL64 1941 aa22.31■■□□□ 1.16
VSX1-205ENST00000429762 NUP210Q8TEM1 1887 aaPredicted RBP22.3■■□□□ 1.16
VSX1-205ENST00000429762 TRIM24O15164 1050 aa22.3■■□□□ 1.16
VSX1-205ENST00000429762 BMP1P13497 986 aa22.3■■□□□ 1.16
VSX1-205ENST00000429762 FUT11Q495W5 492 aa22.3■■□□□ 1.16
VSX1-205ENST00000429762 TCEAL5Q5H9L2 206 aa22.3■■□□□ 1.16
VSX1-205ENST00000429762 RNF43Q68DV7 783 aa22.3■■□□□ 1.16
VSX1-205ENST00000429762 NPAS3Q8IXF0 933 aa22.3■■□□□ 1.16
VSX1-205ENST00000429762 NAT16Q8N8M0 369 aa22.3■■□□□ 1.16
VSX1-205ENST00000429762 ATXN7L3BQ96GX2 97 aa22.3■■□□□ 1.16
VSX1-205ENST00000429762 RPL10LQ96L21 214 aaKnown RBP22.3■■□□□ 1.16
VSX1-205ENST00000429762 C2orf49Q9BVC5 232 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms