RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 FAM160A2Q8N612 972 aaPredicted RBP30.96■■■□□ 2.55
CSNK1E-206ENST00000413574 PABPC3Q9H361 631 aaKnown RBP30.96■■■□□ 2.55
CSNK1E-206ENST00000413574 AMACRQ9UHK6 382 aa30.96■■■□□ 2.55
CSNK1E-206ENST00000413574 C1QTNF3-AMACRE9PGA6 284 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 H0Y858 1186 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 MTSS1O43312 755 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 ADH1BP00325 375 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 TPMTP51580 245 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 GDF10P55107 478 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 RAD51Q06609 339 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 CCNG2Q16589 344 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 FAM71DQ8N9W8 422 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 PRSS33Q8NF86 280 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 ARRDC2Q8TBH0 407 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 ARRDC3Q96B67 414 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 TEKT5Q96M29 485 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 FRMD8P1Q9BZ68 369 aaPredicted RBP30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 KLHL8Q9P2G9 620 aaPredicted RBP30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 CYP8B1Q9UNU6 501 aa30.95■■■□□ 2.55
CSNK1E-206ENST00000413574 NUMA1Q14980 2115 aa30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 A0A1W2PP55 124 aa30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 C5AR1P21730 350 aa30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 ZNF528Q3MIS6 628 aa30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 GDPD4Q6W3E5 623 aa30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 FAM124AQ86V42 546 aa30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 LONP2Q86WA8 852 aa30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 NELL1Q92832 810 aa30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 NKD2Q969F2 451 aaPredicted RBP30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 KLHL32Q96NJ5 620 aa30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 CPEB1Q9BZB8 566 aaKnown RBP30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 ITM2CQ9NQX7 267 aa30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 FBXL12Q9NXK8 326 aa30.95■■■□□ 2.54
CSNK1E-206ENST00000413574 F5H423 210 aaPredicted RBP30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 CD68P34810 354 aaPredicted RBP30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 DRD3P35462 400 aa30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 AP1S1P61966 158 aa30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 ZBTB16Q05516 673 aa30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 SRSF5Q13243 272 aaKnown RBP30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 KCTD19Q17RG1 926 aaPredicted RBP30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 FAM46CQ5VWP2 391 aa30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 ALG1LQ6GMV1 187 aa30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 PID1Q7Z2X4 250 aa30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 WDR5BQ86VZ2 330 aa30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 HDDC3Q8N4P3 179 aa30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 GANCQ8TET4 914 aa30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 ZNF592Q92610 1267 aa30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 NAP1L3Q99457 506 aaPredicted RBP30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 USP36Q9P275 1121 aaKnown RBP30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 ZNF148Q9UQR1 794 aa30.94■■■□□ 2.54
CSNK1E-206ENST00000413574 CCDC163A0A0D9SF12 145 aa30.93■■■□□ 2.54
CSNK1E-206ENST00000413574 KCNJ1P48048 391 aa30.93■■■□□ 2.54
CSNK1E-206ENST00000413574 CCDC110Q8TBZ0 833 aa30.93■■■□□ 2.54
CSNK1E-206ENST00000413574 LRIG1Q96JA1 1093 aa30.93■■■□□ 2.54
CSNK1E-206ENST00000413574 GLOD4Q9HC38 313 aa30.93■■■□□ 2.54
CSNK1E-206ENST00000413574 PCDHGC4Q9Y5F7 938 aa30.93■■■□□ 2.54
CSNK1E-206ENST00000413574 RNASEH2AO75792 299 aaKnown RBP30.92■■■□□ 2.54
CSNK1E-206ENST00000413574 CNTN1Q12860 1018 aa30.92■■■□□ 2.54
CSNK1E-206ENST00000413574 TCF15Q12870 199 aa30.92■■■□□ 2.54
CSNK1E-206ENST00000413574 MAP7D1Q3KQU3 841 aa30.92■■■□□ 2.54
CSNK1E-206ENST00000413574 OMDQ99983 421 aa30.92■■■□□ 2.54
CSNK1E-206ENST00000413574 ATP13A3Q9H7F0 1226 aa30.92■■■□□ 2.54
CSNK1E-206ENST00000413574 PLXND1Q9Y4D7 1925 aa30.92■■■□□ 2.54
CSNK1E-206ENST00000413574 PDE2AO00408 941 aaPredicted RBP30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 MMP2P08253 660 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 NFKB1P19838 968 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 BCL2L1Q07817 233 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 TTC31Q49AM3 519 aaPredicted RBP30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 ZNF805Q5CZA5 627 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 ANKRD20A2Q5SQ80 823 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 ANKRD20A1Q5TYW2 823 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 ANKRD20A3Q5VUR7 823 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 TUBGCP5Q96RT8 1024 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 VAT1Q99536 393 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 FERMT1Q9BQL6 677 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 OSBPL1AQ9BXW6 950 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 FAM126AQ9BYI3 521 aaPredicted RBP30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 NEUROG2Q9H2A3 272 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 SUV39H2Q9H5I1 410 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 HAUS2Q9NVX0 235 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 SCML1Q9UN30 329 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 P2RY2P41231 377 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 CD86P42081 329 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 PARS2Q7L3T8 475 aaKnown RBP30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 PRUNE1Q86TP1 453 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 SPATA22Q8NHS9 363 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 RBM15Q96T37 977 aaKnown RBP eCLIP30.91■■■□□ 2.542e-7■■■■■ 39.2
CSNK1E-206ENST00000413574 ZSCAN32Q9NX65 697 aa30.91■■■□□ 2.54
CSNK1E-206ENST00000413574 ITGB7P26010 798 aa30.9■■■□□ 2.54
CSNK1E-206ENST00000413574 SERPINA4P29622 427 aa30.9■■■□□ 2.54
CSNK1E-206ENST00000413574 MAPK8P45983 427 aa30.9■■■□□ 2.54
CSNK1E-206ENST00000413574 TRAF2Q12933 501 aa30.9■■■□□ 2.54
CSNK1E-206ENST00000413574 GRM3Q14832 879 aa30.9■■■□□ 2.54
CSNK1E-206ENST00000413574 USP39Q53GS9 565 aaKnown RBP30.9■■■□□ 2.54
CSNK1E-206ENST00000413574 TTC27Q6P3X3 843 aa30.9■■■□□ 2.54
CSNK1E-206ENST00000413574 DRICH1Q6PGQ1 229 aaPredicted RBP30.9■■■□□ 2.54
CSNK1E-206ENST00000413574 ZSWIM9Q86XI8 627 aa30.9■■■□□ 2.54
CSNK1E-206ENST00000413574 IMP4Q96G21 291 aaKnown RBP30.9■■■□□ 2.54
CSNK1E-206ENST00000413574 SLC25A51Q9H1U9 297 aa30.9■■■□□ 2.54
CSNK1E-206ENST00000413574 DYRK4Q9NR20 520 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms