RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 DYNC1LI2O43237 492 aaPredicted RBP16.92■□□□□ 0.3
SIPA1-201ENST00000394224 GJB3O75712 270 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 ZBTB11O95625 1053 aaPredicted RBP16.92■□□□□ 0.3
SIPA1-201ENST00000394224 GGT5P36269 586 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 NR2C2P49116 596 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 TNFAIP2Q03169 654 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 HNRNPDQ14103 355 aaKnown RBP16.92■□□□□ 0.3
SIPA1-201ENST00000394224 KLHL35Q6PF15 583 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 MFSD6LQ8IWD5 586 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 ANKRD52Q8NB46 1076 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 CXorf38Q8TB03 319 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 ASB7Q9H672 318 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 NDFIP2Q9NV92 336 aa16.92■□□□□ 0.3
SIPA1-201ENST00000394224 MYBPHLA2RUH7 354 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 MCF2P10911 925 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 CNTFP26441 200 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 PIGFQ07326 219 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 CENPLQ8N0S6 344 aaPredicted RBP16.91■□□□□ 0.3
SIPA1-201ENST00000394224 GPR152Q8TDT2 470 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 VPS50Q96JG6 964 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 NCKIPSDQ9NZQ3 722 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 C6orf203Q9P0P8 240 aaPredicted RBP16.91■□□□□ 0.3
SIPA1-201ENST00000394224 SORCS3Q9UPU3 1222 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 KCTD3Q9Y597 815 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 CRCPO75575 148 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 SLC1A2P43004 574 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 MAGEA10P43363 369 aaPredicted RBP16.91■□□□□ 0.3
SIPA1-201ENST00000394224 SAPCD2Q86UD0 394 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 OSTM1Q86WC4 334 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 OR10Q1Q8NGQ4 319 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 RP9Q8TA86 221 aaKnown RBP16.91■□□□□ 0.3
SIPA1-201ENST00000394224 C1orf50Q9BV19 199 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 ADNPQ9H2P0 1102 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 EXD2Q9NVH0 621 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 RBMX2Q9Y388 322 aaKnown RBP16.91■□□□□ 0.3
SIPA1-201ENST00000394224 COMMD10Q9Y6G5 202 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 A0A0C4DFX4 3053 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 A0A1W2PPW3 197 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 LRIG2O94898 1065 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 LINC00032P0C843 101 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 CDH2P19022 906 aaPredicted RBP16.91■□□□□ 0.3
SIPA1-201ENST00000394224 LSM3P62310 102 aaKnown RBP16.91■□□□□ 0.3
SIPA1-201ENST00000394224 LSMEM2Q8N112 164 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 B3GALNT2Q8NCR0 500 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 RTP4Q96DX8 246 aa16.91■□□□□ 0.3
SIPA1-201ENST00000394224 SARS2Q9NP81 518 aaKnown RBP16.91■□□□□ 0.3
SIPA1-201ENST00000394224 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.91■□□□□ 0.3
SIPA1-201ENST00000394224 RSL24D1Q9UHA3 163 aaKnown RBP16.91■□□□□ 0.3
SIPA1-201ENST00000394224 SBK3P0C264 359 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 GLDCP23378 1020 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 BDNFP23560 247 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 BNIP3Q12983 259 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 PRKAA1Q13131 559 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 SPANXN3Q5MJ09 141 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 GPR158Q5T848 1215 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 C9orf57Q5W0N0 161 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 ARMCX2Q7L311 632 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 ZNF410Q86VK4 478 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 ZC3HC1Q86WB0 502 aaKnown RBP16.9■□□□□ 0.3
SIPA1-201ENST00000394224 APLFQ8IW19 511 aaPredicted RBP16.9■□□□□ 0.3
SIPA1-201ENST00000394224 ACMSDQ8TDX5 336 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 PCDH12Q9NPG4 1184 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 STAP1Q9ULZ2 295 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 MAGED1Q9Y5V3 778 aaPredicted RBP16.9■□□□□ 0.3
SIPA1-201ENST00000394224 UBA6A0AVT1 1052 aaPredicted RBP16.9■□□□□ 0.3
SIPA1-201ENST00000394224 DDNO94850 711 aaPredicted RBP16.9■□□□□ 0.3
SIPA1-201ENST00000394224 PRSS56P0CW18 603 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 ATICP31939 592 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 ICAM3P32942 547 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 ADRA1BP35368 520 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 DCTN2Q13561 401 aaKnown RBP16.9■□□□□ 0.3
SIPA1-201ENST00000394224 SLC25A52Q3SY17 297 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 SLC26A9Q7LBE3 791 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 SCAMP5Q8TAC9 235 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 GABPB2Q8TAK5 448 aaPredicted RBP16.9■□□□□ 0.3
SIPA1-201ENST00000394224 MRPL46Q9H2W6 279 aaKnown RBP16.9■□□□□ 0.3
SIPA1-201ENST00000394224 TMEM30AQ9NV96 361 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 GPRC5DQ9NZD1 345 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 DGKBQ9Y6T7 804 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 COL11A2P13942 1736 aaPredicted RBP16.9■□□□□ 0.3
SIPA1-201ENST00000394224 SHROOM3Q8TF72 1996 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 LPIN1Q14693 890 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 TIFABQ6ZNK6 161 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 GIPC3Q8TF64 312 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 PAAF1Q9BRP4 392 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 ZBTB26Q9HCK0 441 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 CHCHD3Q9NX63 227 aaKnown RBP16.9■□□□□ 0.3
SIPA1-201ENST00000394224 WARS2Q9UGM6 360 aaKnown RBP16.9■□□□□ 0.3
SIPA1-201ENST00000394224 UNC80Q8N2C7 3258 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 MCM3APO60318 1980 aa16.9■□□□□ 0.3
SIPA1-201ENST00000394224 HEATR9A2RTY3 570 aa16.89■□□□□ 0.29
SIPA1-201ENST00000394224 ONECUT3O60422 494 aaPredicted RBP16.89■□□□□ 0.29
SIPA1-201ENST00000394224 AP2A1O95782 977 aa16.89■□□□□ 0.29
SIPA1-201ENST00000394224 GHRHRQ02643 423 aa16.89■□□□□ 0.29
SIPA1-201ENST00000394224 IKBKEQ14164 716 aa16.89■□□□□ 0.29
SIPA1-201ENST00000394224 GRIK4Q16099 956 aa16.89■□□□□ 0.29
SIPA1-201ENST00000394224 C16orf87Q6PH81 154 aa16.89■□□□□ 0.29
SIPA1-201ENST00000394224 DNAJC14Q6Y2X3 702 aaPredicted RBP16.89■□□□□ 0.29
SIPA1-201ENST00000394224 NSUN5Q96P11 429 aaKnown RBP16.89■□□□□ 0.29
SIPA1-201ENST00000394224 CCDC90BQ9GZT6 254 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms