RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 EVLQ9UI08 416 aaPredicted RBP11.08□□□□□ -0.63
BRCC3-204ENST00000369462 HCN2Q9UL51 889 aa11.08□□□□□ -0.63
BRCC3-204ENST00000369462 ATG2BQ96BY7 2078 aa11.08□□□□□ -0.63
BRCC3-204ENST00000369462 ERI2A8K979 691 aaKnown RBP11.08□□□□□ -0.64
BRCC3-204ENST00000369462 K7EQS6 105 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 NDC80O14777 642 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 IGSF6O95976 241 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 HLA-EP13747 358 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 GLULP15104 373 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 CES1P23141 567 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 GKP32189 559 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 SEC13P55735 322 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 WNT3AP56704 352 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 SKOR1P84550 965 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 CDK16Q00536 496 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 GRSF1Q12849 480 aaKnown RBP eCLIP11.08□□□□□ -0.64
BRCC3-204ENST00000369462 EGFLAMQ63HQ2 1017 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 SERPINA13PQ6UXR4 307 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 DPY19L3Q6ZPD9 716 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 TPRG1Q6ZUI0 275 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 SRLQ86TD4 932 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 CCDC25Q86WR0 208 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 GDAP1L1Q96MZ0 367 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 PPP1R2P1Q96PQ5 205 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 FSD1LQ9BXM9 530 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 EIF2B3Q9NR50 452 aaKnown RBP11.08□□□□□ -0.64
BRCC3-204ENST00000369462 PIH1D1Q9NWS0 290 aaKnown RBP11.08□□□□□ -0.64
BRCC3-204ENST00000369462 MTRF1LQ9UGC7 380 aaKnown RBP11.08□□□□□ -0.64
BRCC3-204ENST00000369462 PCDHGC4Q9Y5F7 938 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 MUC3AQ02505 3323 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 KIAA1549LQ6ZVL6 1849 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 C19orf67A6NJJ6 358 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 SMAPO00193 183 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 AVILO75366 819 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 AGTP01019 485 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 EGFP01133 1207 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 FAM153BP0C7A2 387 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 RECQLP46063 649 aaPredicted RBP11.08□□□□□ -0.64
BRCC3-204ENST00000369462 MPP3Q13368 585 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 FAM153CQ494X1 144 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 CARD16Q5EG05 197 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 TMEM196Q5HYL7 178 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 ZNF513Q8N8E2 541 aaPredicted RBP11.08□□□□□ -0.64
BRCC3-204ENST00000369462 EIF1ADQ8N9N8 165 aaKnown RBP11.08□□□□□ -0.64
BRCC3-204ENST00000369462 OR2A12Q8NGT7 310 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 MRGPRX2Q96LB1 330 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 ASB2Q96Q27 587 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 FAM129AQ9BZQ8 928 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 LRRC40Q9H9A6 602 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 CACNA2D2Q9NY47 1150 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 THAP10Q9P2Z0 257 aaPredicted RBP11.08□□□□□ -0.64
BRCC3-204ENST00000369462 STARD13Q9Y3M8 1113 aa11.08□□□□□ -0.64
BRCC3-204ENST00000369462 TCF20Q9UGU0 1960 aaKnown RBP11.07□□□□□ -0.64
BRCC3-204ENST00000369462 PSMD3O43242 534 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 TIE1P35590 1138 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 IL12RB1P42701 662 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 TNFRSF4P43489 277 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 CCNHP51946 323 aaPredicted RBP11.07□□□□□ -0.64
BRCC3-204ENST00000369462 AP1S1P61966 158 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 SARNPP82979 210 aaKnown RBP11.07□□□□□ -0.64
BRCC3-204ENST00000369462 C2orf27AQ580R0 203 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 FSTL4Q6MZW2 842 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 NCEH1Q6PIU2 408 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 KDELC1Q6UW63 502 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 CAMK1DQ8IU85 385 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 KLHDC8BQ8IXV7 354 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 CHPFQ8IZ52 775 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 ZCCHC9Q8N567 271 aaKnown RBP11.07□□□□□ -0.64
BRCC3-204ENST00000369462 MCUQ8NE86 351 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 FAM3CQ92520 227 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 PTPRN2Q92932 1015 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 TADA1Q96BN2 335 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 SERPINB12Q96P63 405 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 FICDQ9BVA6 458 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 CA14Q9ULX7 337 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 SHISA7A6NL88 538 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 SUN1O94901 812 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 DRD1P21728 446 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 KIR2DL1P43626 348 aaPredicted RBP11.07□□□□□ -0.64
BRCC3-204ENST00000369462 MLF2Q15773 248 aaPredicted RBP11.07□□□□□ -0.64
BRCC3-204ENST00000369462 HIF1AQ16665 826 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 MYLK3Q32MK0 819 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 HNRNPA1L2Q32P51 320 aaKnown RBP11.07□□□□□ -0.64
BRCC3-204ENST00000369462 NAPEPLDQ6IQ20 393 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 PPP1R21Q6ZMI0 780 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 CAND1Q86VP6 1230 aaKnown RBP11.07□□□□□ -0.64
BRCC3-204ENST00000369462 PDIK1LQ8N165 341 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 DNAAF3Q8N9W5 541 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 KDM1BQ8NB78 822 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 CHST14Q8NCH0 376 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 OR52K1Q8NGK4 314 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 PDCD6IPQ8WUM4 868 aaKnown RBP11.07□□□□□ -0.64
BRCC3-204ENST00000369462 TMEM245Q9H330 911 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 ZDHHC6Q9H6R6 413 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 RAI2Q9Y5P3 530 aa11.07□□□□□ -0.64
BRCC3-204ENST00000369462 NCOR1O75376 2440 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 POP4O95707 220 aaKnown RBP11.06□□□□□ -0.64
BRCC3-204ENST00000369462 GSRP00390 522 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 WASP42768 502 aa11.06□□□□□ -0.64
BRCC3-204ENST00000369462 CHRNA4P43681 627 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms