RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 HIST1H2AGP0C0S8 130 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 HIST1H2ADP20671 130 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 CCL23P55773 120 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 KLF10Q13118 480 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 BRMS1LQ5PSV4 323 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 POTEHQ6S545 545 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 CLEC4FQ8N1N0 589 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 TRPC4APQ8TEL6 797 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 HIST1H2AHQ96KK5 128 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 HIST1H2AJQ99878 128 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 H2AFJQ9BTM1 129 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 TM6SF2Q9BZW4 377 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 SLC39A8Q9C0K1 460 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 CLPBQ9H078 707 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 CRTAC1Q9NQ79 661 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 NKX1-2Q9UD57 310 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 CITO14578 2027 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 DNAJC25-GNG10A0A024R161 153 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 TTC24A2A3L6 582 aaPredicted RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 FAM159BA6NKW6 160 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 PSMD12O00232 456 aaPredicted RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 CHRNGP07510 517 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ATP5C1P36542 298 aaKnown RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ABL2P42684 1182 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 PGGT1BP53609 377 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 DDX39BQ13838 428 aaKnown RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ACSBG2Q5FVE4 666 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 SNX31Q8N9S9 440 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ARRDC4Q8NCT1 418 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 CCT7Q99832 543 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ACBD6Q9BR61 282 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 C17orf80Q9BSJ5 609 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 THUMPD3Q9BV44 507 aaKnown RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 AGO3Q9H9G7 860 aaKnown RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 CATSPERZQ9NTU4 200 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 IGSF9Q9P2J2 1179 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 CROTQ9UKG9 612 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 A0A087X1B8 175 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 RGSL1A5PLK6 1076 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 PIRO00625 290 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 MYL4P12829 197 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 SP100P23497 879 aaPredicted RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 GLUD2P49448 558 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 TMED1Q13445 227 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 LPCAT4Q643R3 524 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ANKS6Q68DC2 871 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 GDF6Q6KF10 455 aaPredicted RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ZNF467Q7Z7K2 595 aaPredicted RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 PPP2R3CQ969Q6 453 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 VPS50Q96JG6 964 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ACOX2Q99424 681 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 NPAS2Q99743 824 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 MRPL57Q9BQC6 102 aaKnown RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 HAUS8Q9BT25 410 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ADGRE3Q9BY15 652 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 NMRK2Q9NPI5 230 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 SEPT3Q9UH03 358 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 BTRCQ9Y297 605 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 NEMP2A6NFY4 417 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ATP5BP06576 529 aaKnown RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ATP6V1C1P21283 382 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 GJA5P36382 358 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 PBX3P40426 434 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 PRKAA2P54646 552 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 SLC18A2Q05940 514 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ELAVL2Q12926 359 aaKnown RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 NR6A1Q15406 480 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 NRF1Q16656 503 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 INSCQ1MX18 579 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 THEMIS2Q5TEJ8 643 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 IRGCQ6NXR0 463 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 PIWIL4Q7Z3Z4 852 aaKnown RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 LENG8Q96PV6 779 aaPredicted RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 NPY6RQ99463 290 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ADNPQ9H2P0 1102 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 GDAP2Q9NXN4 497 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 PRKAG2Q9UGJ0 569 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 VPS9D1Q9Y2B5 631 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 VWA7Q9Y334 891 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 COL5A3P25940 1745 aaPredicted RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 SCN9AQ15858 1988 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 TMEM114B3SHH9 223 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 PEX1O43933 1283 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 CLASP2O75122 1294 aaKnown RBP8.54□□□□□ -1.04
PTPRK-206ENST00000368215 PEX11AO75192 247 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 TM7SF2O76062 418 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 WEE1P30291 646 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ZBTB17Q13105 803 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ARHGEF7Q14155 803 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 KRT72Q14CN4 511 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 SZRD1Q7Z422 152 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 DENND1AQ8TEH3 1009 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 TMEM174Q8WUU8 243 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 TBATAQ96M53 351 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 UROC1Q96N76 676 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 SLC9A7Q96T83 725 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 ECSITQ9BQ95 431 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 PAAF1Q9BRP4 392 aa8.54□□□□□ -1.04
PTPRK-206ENST00000368215 SENP6Q9GZR1 1112 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms