RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ACSS3Q9H6R3 686 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 NT5MQ9NPB1 228 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 KLC4Q9NSK0 619 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 UBA2Q9UBT2 640 aaPredicted RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 ZC3H7BQ9UGR2 993 aaKnown RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 OR51B4Q9Y5P0 310 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 CXorf51AA0A1B0GTR3 108 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 EXOC1LA0A1B0GW35 172 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 LOC730098B7Z3J9 87 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 CDH16O75309 829 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 MT-CYBP00156 380 aaPredicted RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 SPARCL1Q14515 664 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 ZNF235Q14590 738 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 SLC14A2Q15849 920 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 LONRF1Q17RB8 773 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 KLHL38Q2WGJ6 581 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 TNFAIP8L3Q5GJ75 292 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 FSCBQ5H9T9 825 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 ARMC3Q5W041 872 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 STEAP4Q687X5 459 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 RNF135Q8IUD6 432 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 ARID3BQ8IVW6 561 aaPredicted RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 CCDC117Q8IWD4 279 aaPredicted RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 DCAF4L2Q8NA75 395 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 TTC16Q8NEE8 873 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 SPATA22Q8NHS9 363 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 FIBINQ8TAL6 211 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 RIN3Q8TB24 985 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 EPS8L3Q8TE67 593 aaKnown RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 FGF13Q92913 245 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 TADA1Q96BN2 335 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 ALG14Q96F25 216 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 STAMBPL1Q96FJ0 436 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 ZSWIM3Q96MP5 696 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 PSKH2Q96QS6 385 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 MGME1Q9BQP7 344 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 SPON2Q9BUD6 331 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 STMN4Q9H169 189 aaPredicted RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 BFARQ9NZS9 450 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 SEPT3Q9UH03 358 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 RABGEF1Q9UJ41 708 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 CAPN7Q9Y6W3 813 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 MYO10Q9HD67 2058 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 TCRBV9S1A1TA0A576 114 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 MAGEB16A2A368 324 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 PDLIM1O00151 329 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 SLC9A3R1O14745 358 aaPredicted RBP12.22□□□□□ -0.45
USF1-203ENST00000368021 IMPDH2P12268 514 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 STX2P32856 288 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 ADRA1AP35348 466 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 NPY2RP49146 381 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 SESN2P58004 480 aaPredicted RBP12.22□□□□□ -0.45
USF1-203ENST00000368021 SLC12A1Q13621 1099 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 INO80DQ53TQ3 878 aaPredicted RBP12.22□□□□□ -0.45
USF1-203ENST00000368021 FYB2Q5VWT5 728 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 POTEHQ6S545 545 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 PRPF39Q86UA1 669 aaKnown RBP12.22□□□□□ -0.45
USF1-203ENST00000368021 CELF5Q8N6W0 485 aaKnown RBP12.22□□□□□ -0.45
USF1-203ENST00000368021 ZNF557Q8N988 423 aaPredicted RBP12.22□□□□□ -0.45
USF1-203ENST00000368021 DNAAF3Q8N9W5 541 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 OR52K1Q8NGK4 314 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 TLCD1Q96CP7 247 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 XPO6Q96QU8 1125 aaKnown RBP12.22□□□□□ -0.45
USF1-203ENST00000368021 CYTH2Q99418 400 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 TBL1YQ9BQ87 522 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 C2orf49Q9BVC5 232 aaPredicted RBP12.22□□□□□ -0.45
USF1-203ENST00000368021 IL22Q9GZX6 179 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 CENPHQ9H3R5 247 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 EURLQ9NYK6 297 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 UBP1Q9NZI7 540 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 LGALS13Q9UHV8 139 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 SLC24A2Q9UI40 661 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 MUTYHQ9UIF7 546 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 MAD1L1Q9Y6D9 718 aa12.22□□□□□ -0.45
USF1-203ENST00000368021 TLDC2A0PJX2 215 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 CBX4O00257 560 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 RGS16O15492 202 aaPredicted RBP12.21□□□□□ -0.45
USF1-203ENST00000368021 USP12O75317 370 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 ZMPSTE24O75844 475 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 AGTP01019 485 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 PENKP01210 267 aaPredicted RBP12.21□□□□□ -0.45
USF1-203ENST00000368021 MMP2P08253 660 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 LAMP2P13473 410 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 PGAM1P18669 254 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 CES1P23141 567 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 MGAT1P26572 445 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 MZF1P28698 734 aaPredicted RBP12.21□□□□□ -0.45
USF1-203ENST00000368021 SH3BGRP55822 239 aaPredicted RBP12.21□□□□□ -0.45
USF1-203ENST00000368021 ARF5P84085 180 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 KCTD16Q68DU8 428 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 KDELC1Q6UW63 502 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 RANBP10Q6VN20 620 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 UNC5AQ6ZN44 842 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 CAPN12Q6ZSI9 719 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 TPGS1Q6ZTW0 290 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 RBM12BQ8IXT5 1001 aaKnown RBP12.21□□□□□ -0.45
USF1-203ENST00000368021 MPP5Q8N3R9 675 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 PGBD5Q8N414 524 aa12.21□□□□□ -0.45
USF1-203ENST00000368021 IPMKQ8NFU5 416 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms