RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 GRXCR2A6NFK2 248 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 NDUFB10O96000 172 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 NT5C2P49902 561 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 IST1P53990 364 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 OR8H1Q8NGG4 311 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 SUSD6Q92537 303 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 CIDEBQ9UHD4 219 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 TUBE1Q9UJT0 475 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 DUSP10Q9Y6W6 482 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 TCOF1Q13428 1488 aaKnown RBP16.54■□□□□ 0.24
PTCH1-201ENST00000331920 SAGP10523 405 aaPredicted RBP16.53■□□□□ 0.24
PTCH1-201ENST00000331920 DNASE1L3Q13609 305 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 PTCH1Q13635 1447 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 UBE2J2Q8N2K1 259 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 QRFPRQ96P65 431 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 PARPBPQ9NWS1 579 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 PCDHA11Q9Y5I1 949 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 SNCAIPQ9Y6H5 919 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 SCGB1D2O95969 90 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 ABRQ12979 859 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 DNAAF5Q86Y56 855 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 TRPV1Q8NER1 839 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 LPAR1Q92633 364 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 SLC47A1Q96FL8 570 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 NAT9Q9BTE0 207 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 SLC6A15Q9H2J7 730 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 ANKRD6Q9Y2G4 727 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 RPH3AQ9Y2J0 694 aaPredicted RBP16.53■□□□□ 0.24
PTCH1-201ENST00000331920 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 MID1O15344 667 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 AP2A2O94973 939 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 FAM124AQ86V42 546 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 C2orf73Q8N5S3 287 aaPredicted RBP16.53■□□□□ 0.24
PTCH1-201ENST00000331920 NELL1Q92832 810 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 C1GALT1C1Q96EU7 318 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 PHF12Q96QT6 1004 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 DDX20Q9UHI6 824 aaKnown RBP16.53■□□□□ 0.24
PTCH1-201ENST00000331920 PACSIN3Q9UKS6 424 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 GPATCH8Q9UKJ3 1502 aaKnown RBP16.53■□□□□ 0.24
PTCH1-201ENST00000331920 A0A087X1B8 175 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 AVILO75366 819 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 KDM4BO94953 1096 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 CSN2P05814 226 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 VDRP11473 427 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 CYP11B1P15538 503 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 ALAS2P22557 587 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 EIF4BP23588 611 aaKnown RBP16.53■□□□□ 0.24
PTCH1-201ENST00000331920 ZFP69Q49AA0 526 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 ZNF280DQ6N043 979 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 SPESP1Q6UW49 350 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 VANGL1Q8TAA9 524 aaPredicted RBP16.53■□□□□ 0.24
PTCH1-201ENST00000331920 KAT2AQ92830 837 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 FAIM2Q9BWQ8 316 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 GSTT1P30711 240 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 TXNL4AP83876 142 aaKnown RBP16.53■□□□□ 0.24
PTCH1-201ENST00000331920 ARMC12Q5T9G4 340 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 RAD9BQ6WBX8 426 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 FBXO16Q8IX29 292 aaPredicted RBP16.53■□□□□ 0.24
PTCH1-201ENST00000331920 C5orf34Q96MH7 638 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 UCKL1Q9NWZ5 548 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 NAALADL1Q9UQQ1 740 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 SAMHD1Q9Y3Z3 626 aaKnown RBP16.53■□□□□ 0.24
PTCH1-201ENST00000331920 MAGEB16A2A368 324 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 TPP1O14773 563 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 CBX6O95503 412 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 SERPINE1P05121 402 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 DEFA5Q01523 94 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 PTPN20Q4JDL3 420 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 SNTG2Q9NY99 539 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 ISM1B1AKI9 464 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 ABCG1P45844 678 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 WDR59Q6PJI9 974 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 CHERPQ8IWX8 916 aaKnown RBP16.53■□□□□ 0.24
PTCH1-201ENST00000331920 TMEM176AQ96HP8 235 aa16.53■□□□□ 0.24
PTCH1-201ENST00000331920 COL15A1P39059 1388 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 DNTTP04053 509 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 USP17L7P0C7H9 530 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 TTC27Q6P3X3 843 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 PCDHGB3Q9Y5G1 929 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 DGKBQ9Y6T7 804 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 GATBO75879 557 aaKnown RBP16.52■□□□□ 0.24
PTCH1-201ENST00000331920 NAB1Q13506 487 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 CETPP11597 493 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 NFIAQ12857 509 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 CHAF1BQ13112 559 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 SLC30A6Q6NXT4 461 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 CLIP4Q8N3C7 705 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 ZNF184Q99676 751 aaPredicted RBP16.52■□□□□ 0.24
PTCH1-201ENST00000331920 STARD7Q9NQZ5 370 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 CNOT6Q9ULM6 557 aaKnown RBP16.52■□□□□ 0.24
PTCH1-201ENST00000331920 U3KQV3 271 aa16.52■□□□□ 0.24
PTCH1-201ENST00000331920 C19orf81C9J6K1 198 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 TXNDC11Q6PKC3 985 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 C3orf67Q6ZVT6 689 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 TKTP29401 623 aaKnown RBP16.52■□□□□ 0.23
PTCH1-201ENST00000331920 SLC12A3P55017 1021 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 BNIP2Q12982 314 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 RUNDC3AQ59EK9 446 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 SCUBE3Q8IX30 993 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms