RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ANKRD36BP1Q96IX9 119 aa17.88■□□□□ 0.45
CDKN1B-201ENST00000228872 TASP1Q9H6P5 420 aa17.88■□□□□ 0.45
CDKN1B-201ENST00000228872 SPAG4Q9NPE6 437 aa17.88■□□□□ 0.45
CDKN1B-201ENST00000228872 TMEM9Q9P0T7 183 aa17.88■□□□□ 0.45
CDKN1B-201ENST00000228872 SFMBT1Q9UHJ3 866 aa17.88■□□□□ 0.45
CDKN1B-201ENST00000228872 MFHAS1Q9Y4C4 1052 aa17.88■□□□□ 0.45
CDKN1B-201ENST00000228872 CILPO75339 1184 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 ETFBP38117 255 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 GRM5P41594 1212 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 GNA12Q03113 381 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 ITGADQ13349 1161 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 INTS11Q5TA45 600 aaKnown RBP17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 LRRC8EQ6NSJ5 796 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 SLC2A7Q6PXP3 512 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 EPHX4Q8IUS5 362 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 ZC3H7AQ8IWR0 971 aaKnown RBP17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 TMEM130Q8N3G9 435 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 HMGCLL1Q8TB92 370 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 RDH11Q8TC12 318 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 CANT1Q8WVQ1 401 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 SNX27Q96L92 541 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 PARK7Q99497 189 aaKnown RBP17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 EIF2AQ9BY44 585 aaKnown RBP17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 MAGEB5Q9BZ81 275 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 MUC3BQ9H195 1237 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 RIC8BQ9NVN3 520 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 ARMC1Q9NVT9 282 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 GOLGA8TH3BQL2 631 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 SDHDO14521 159 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 CABYRO75952 493 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 OXSR1O95747 527 aaPredicted RBP17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 CYP3A5P20815 502 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 PRKAA2P54646 552 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 STX5Q13190 355 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 DGKDQ16760 1214 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 SLC36A3Q495N2 470 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 KCTD8Q6ZWB6 473 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 CAMK1DQ8IU85 385 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 ZNF669Q96BR6 464 aaPredicted RBP17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 MAELQ96JY0 434 aaKnown RBP17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 TMEM98Q9Y2Y6 226 aa17.87■□□□□ 0.45
CDKN1B-201ENST00000228872 CCDC162PA2VCL2 907 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 KRBA1A5PL33 1030 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 TMEM233B4DJY2 109 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 DYNC1LI2O43237 492 aaPredicted RBP17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 NOL3O60936 208 aaKnown RBP17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 SDC4P31431 198 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 GRSF1Q12849 480 aaKnown RBP eCLIP17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 SEPT6Q14141 434 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 FAM117BQ6P1L5 589 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 GALNT18Q6P9A2 607 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 PELI3Q8N2H9 469 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 KDM1BQ8NB78 822 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 HEXIM2Q96MH2 286 aaKnown RBP17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 PTPN18Q99952 460 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 MRPL4Q9BYD3 311 aaKnown RBP17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 ZNF236Q9UL36 1845 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 FARP2O94887 1054 aaPredicted RBP17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 HDCP19113 662 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 PSMB4P28070 264 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 HUNKP57058 714 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 NCBP2-AS2Q69YL0 99 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 DHFR2Q86XF0 187 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 TAMM41Q96BW9 452 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 LGMNQ99538 433 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 CEP41Q9BYV8 373 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 ATAD3AQ9NVI7 634 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 HESX1Q9UBX0 185 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 SIX4Q9UIU6 781 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 TANC1Q9C0D5 1861 aa17.86■□□□□ 0.45
CDKN1B-201ENST00000228872 IGKV6D-21A0A0A0MT36 114 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 AQP9O43315 295 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 MSCO60682 206 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 CLIC3O95833 236 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 VDRP11473 427 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 CCNA2P20248 432 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 RGS7P49802 495 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 DPYSL2Q16555 572 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 TRIM16LQ309B1 348 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 IGFN1Q86VF2 1251 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 OR2T34Q8NGX1 318 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 OR2T3Q8NH03 318 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 FBXL20Q96IG2 436 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 UPF3AQ9H1J1 476 aaKnown RBP17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 VRTNQ9H8Y1 702 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 RNF103O00237 685 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 SPTLC1O15269 473 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 ATP6V1B2P21281 511 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 GRIA3P42263 894 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 MAPK10P53779 464 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 TNK2Q07912 1038 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 OLIG2Q13516 323 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 NEDD8Q15843 81 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 SAMD4BQ5PRF9 694 aaKnown RBP17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 COLGALT2Q8IYK4 626 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 PCYOX1LQ8NBM8 494 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 CSPG4P5Q96PW8 444 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 OLFM1Q99784 485 aa17.85■□□□□ 0.45
CDKN1B-201ENST00000228872 C1orf50Q9BV19 199 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms