RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 NPPAP01160 153 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 ACAT1P24752 427 aaKnown RBP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 LMO2P25791 158 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 MAPK3P27361 379 aaPredicted RBP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 RAD23BP54727 409 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 C1QBPQ07021 282 aaKnown RBP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 C15orf59Q2T9L4 293 aaPredicted RBP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 TPGS2Q68CL5 300 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 CYB5D1Q6P9G0 228 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 MON1BQ7L1V2 547 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 GSTA5Q7RTV2 222 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 TRPM8Q7Z2W7 1104 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 PHF13Q86YI8 300 aaPredicted RBP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 RCOR2Q8IZ40 523 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 FUKQ8N0W3 1084 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 ZBTB34Q8NCN2 500 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 RFWD2Q8NHY2 731 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 TEKT4Q8WW24 435 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 NKD1Q969G9 470 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 RBM41Q96IZ5 413 aaKnown RBP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 TWNKQ96RR1 684 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 RTP3Q9BQQ7 232 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 ELOVL4Q9GZR5 314 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 WNT5BQ9H1J7 359 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 KCNK9Q9NPC2 374 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 CCDC177Q9NQR7 707 aaPredicted RBP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 NKIRAS1Q9NYS0 192 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 COQ3Q9NZJ6 369 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 SNX8Q9Y5X2 465 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 BACE2Q9Y5Z0 518 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.79□□□□□ -0.52
LINC00538-201ENST00000626109 LRRC14BA6NHZ5 514 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 PI4K2BG5E9Z4 385 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 K7EPI3 171 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 PLD2O14939 933 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 HCRTO43612 131 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 TSPAN3O60637 253 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 CDH16O75309 829 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 CD19P15391 556 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 IVDP26440 423 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 SLC8A1P32418 973 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 INTS6LQ5JSJ4 861 aaKnown RBP11.79□□□□□ -0.52
LINC00538-201ENST00000626109 PPP1R21Q6ZMI0 780 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 ACOT1Q86TX2 421 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 SYTL1Q8IYJ3 562 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 DCP1BQ8IZD4 617 aaKnown RBP11.79□□□□□ -0.52
LINC00538-201ENST00000626109 PLD6Q8N2A8 252 aaKnown RBP11.79□□□□□ -0.52
LINC00538-201ENST00000626109 ATP11CQ8NB49 1132 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 GOLM1Q8NBJ4 401 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 SLC4A11Q8NBS3 891 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 B3GALNT2Q8NCR0 500 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 OR10T2Q8NGX3 314 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 GDPD5Q8WTR4 605 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 GRAMD1AQ96CP6 724 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 OSBPL8Q9BZF1 889 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 VCX3BQ9H321 246 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 DPEP3Q9H4B8 488 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 ZNF576Q9H609 170 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 VPS28Q9UK41 221 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 USP15Q9Y4E8 981 aaPredicted RBP11.79□□□□□ -0.52
LINC00538-201ENST00000626109 NME7Q9Y5B8 376 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 PLXNA4Q9HCM2 1894 aa11.79□□□□□ -0.52
LINC00538-201ENST00000626109 TMEM120BA0PK00 339 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 ATP2C2O75185 946 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 SLC22A3O75751 556 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 TJP3O95049 919 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 CXCL14O95715 111 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 ARAFP10398 606 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 RALAP11233 206 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 CPB1P15086 417 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 PTPN1P18031 435 aaKnown RBP11.78□□□□□ -0.52
LINC00538-201ENST00000626109 IGFBP4P22692 258 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 SOX6P35712 828 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 IFNAR2P48551 515 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 ETV1P50549 477 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 ERVFC1P60507 584 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 DMPKQ09013 629 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 KLF1Q13351 362 aaPredicted RBP11.78□□□□□ -0.52
LINC00538-201ENST00000626109 MAMLD1Q13495 774 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 FAM209AQ5JX71 171 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 PLPP4Q5VZY2 271 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 PLEKHA7Q6IQ23 1121 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 IKBIPQ70UQ0 350 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 CPNE8Q86YQ8 564 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 CRYBG2Q8N1P7 616 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 FEZF2Q8TBJ5 459 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 AUTS2Q8WXX7 1259 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 USP7Q93009 1102 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 HEXIM2Q96MH2 286 aaKnown RBP11.78□□□□□ -0.52
LINC00538-201ENST00000626109 CFAP57Q96MR6 1250 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 TTC25Q96NG3 672 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 FERD3LQ96RJ6 166 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 UQCC2Q9BRT2 126 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 EMILIN2Q9BXX0 1053 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 ZCWPW1Q9H0M4 648 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 CD93Q9NPY3 652 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 AKAP7Q9P0M2 348 aaPredicted RBP11.78□□□□□ -0.52
LINC00538-201ENST00000626109 LGALS13Q9UHV8 139 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 KIAA1257Q9ULG3 409 aa11.78□□□□□ -0.52
LINC00538-201ENST00000626109 CDY1Q9Y6F8 540 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms