RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 APOL5Q9BWW9 433 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 ELOVL4Q9GZR5 314 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 DDX43Q9NXZ2 648 aaKnown RBP14.79□□□□□ -0.04
VPS36-207ENST00000611132 FARP1Q9Y4F1 1045 aaPredicted RBP14.79□□□□□ -0.04
VPS36-207ENST00000611132 NUP188Q5SRE5 1749 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 PARP4Q9UKK3 1724 aaKnown RBP14.79□□□□□ -0.04
VPS36-207ENST00000611132 ZNF536O15090 1300 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 FAM159BA6NKW6 160 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 C2CD4BA6NLJ0 364 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 KATNA1O75449 491 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 SEC24AO95486 1093 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 METTL18O95568 372 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 MSH3P20585 1137 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 TRAF3Q13114 568 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 SPIDRQ14159 915 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 PLCL1Q15111 1095 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 PPP1R26Q5T8A7 1209 aaPredicted RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 OR52E8Q6IFG1 317 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 TBC1D21Q8IYX1 336 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 PHTF2Q8N3S3 785 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 REPS2Q8NFH8 660 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 WDR12Q9GZL7 423 aaKnown RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 LEF1Q9UJU2 399 aaPredicted RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 NENFQ9UMX5 172 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 TRAF6Q9Y4K3 522 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 LINC00854A0A1B0GVQ3 168 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 SPATA31C2B4DYI2 1134 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 HMBSP08397 361 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 ALOX5P09917 674 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 HGFP14210 728 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 XPAP23025 273 aaPredicted RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 ZNF135P52742 658 aaPredicted RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 ILDR2Q71H61 639 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 BNIPLQ7Z465 357 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 CUZD1Q86UP6 607 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 APOL4Q9BPW4 351 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 CCDC106Q9BWC9 280 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 TUBA8Q9NY65 449 aaPredicted RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 TUBGCP4Q9UGJ1 667 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 BBIP1A8MTZ0 92 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 TK2O00142 265 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 TRIM24O15164 1050 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 PGK2P07205 417 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 IMPDH2P12268 514 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 HOXB8P17481 243 aaPredicted RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 ALOX12P18054 663 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 PPM1FP49593 454 aaPredicted RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 CLCN5P51795 746 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 PFKFB4Q16877 469 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 DEPDC1Q5TB30 811 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 IGDCC3Q8IVU1 814 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 FBXO16Q8IX29 292 aaPredicted RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 CLYBLQ8N0X4 340 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 OR8H2Q8N162 312 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 PTGR2Q8N8N7 351 aaPredicted RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 CAPSLQ8WWF8 208 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 B3GNT5Q9BYG0 378 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 CNGB3Q9NQW8 809 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 STX7O15400 261 aaKnown RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 TADA2AO75478 443 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 HIST1H2AGP0C0S8 130 aaPredicted RBP14.78□□□□□ -0.04
VPS36-207ENST00000611132 HIST1H2ADP20671 130 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 PRKCHP24723 683 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 UGT3A1Q6NUS8 523 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 GALNT18Q6P9A2 607 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 SPPL2CQ8IUH8 684 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 LZTR1Q8N653 840 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.78□□□□□ -0.04
VPS36-207ENST00000611132 HSPBAP1Q96EW2 488 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 HIST1H2AHQ96KK5 128 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 HIST1H2AJQ99878 128 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 H2AFJQ9BTM1 129 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 TRMOQ9BU70 441 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 ADI1Q9BV57 179 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 ZNF358Q9NW07 568 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 C3orf18Q9UK00 162 aa14.78□□□□□ -0.04
VPS36-207ENST00000611132 TIAM2Q8IVF5 1701 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 FAM149AA5PLN7 773 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 RRN3P2A6NIE6 340 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 YDJCA8MPS7 323 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 MATKP42679 507 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 LSM3P62310 102 aaKnown RBP14.77□□□□□ -0.04
VPS36-207ENST00000611132 ILF2Q12905 390 aaKnown RBP14.77□□□□□ -0.04
VPS36-207ENST00000611132 ITGA7Q13683 1181 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 PLEKHG4Q58EX7 1191 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 MARC1Q5VT66 337 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 SH3BP5LQ7L8J4 393 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 FASTKD5Q7L8L6 764 aaKnown RBP14.77□□□□□ -0.04
VPS36-207ENST00000611132 SAMD7Q7Z3H4 446 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 ADHFE1Q8IWW8 467 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 FBXO30Q8TB52 745 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 REXO4Q9GZR2 422 aaKnown RBP14.77□□□□□ -0.04
VPS36-207ENST00000611132 RMND5AQ9H871 391 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 WWOXQ9NZC7 414 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 SLC13A4Q9UKG4 626 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 PNMA8CA0A1B0GUJ8 204 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 E7ESA3 106 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 ZSCAN9O15535 394 aaPredicted RBP14.77□□□□□ -0.04
VPS36-207ENST00000611132 B4GALT5O43286 388 aa14.77□□□□□ -0.04
VPS36-207ENST00000611132 GRM3Q14832 879 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms