RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 XPNPEP3Q9NQH7 507 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 PDLIM7Q9NR12 457 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 PRKAG3Q9UGI9 489 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 RNF112Q9ULX5 631 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 SNX8Q9Y5X2 465 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 A0A096LPK6 155 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 ANKRD34BA5PLL1 514 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 PSMD11O00231 422 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 CYB561D2O14569 222 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 SYNCRIPO60506 623 aaKnown RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 PEX10O60683 326 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 RGS20O76081 388 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 BAIAP3O94812 1187 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 RASGRP1O95267 797 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 MOCS2O96007 188 aaPredicted RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 EGFRP00533 1210 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 JCHAINP01591 159 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 PROCP04070 461 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 SERPINA6P08185 405 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 CCDC130P13994 396 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 PCSK1P29120 753 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 SERPINB5P36952 375 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 GPD2P43304 727 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 MASP1P48740 699 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 ATXN3P54252 364 aaPredicted RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 PRAMEP78395 509 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 FLOT2Q14254 428 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 MSS51Q4VC12 460 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 SPANXN3Q5MJ09 141 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 SEL1L3Q68CR1 1132 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 SCN4BQ8IWT1 228 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 ANKRD52Q8NB46 1076 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 IPMKQ8NFU5 416 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 DCAKDQ8WVC6 231 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 EXT2Q93063 718 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 C7orf26Q96N11 449 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 VPS35Q96QK1 796 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 CADM1Q9BY67 442 aaKnown RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 EML4Q9HC35 981 aaKnown RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 VTA1Q9NP79 307 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 IARS2Q9NSE4 1012 aaKnown RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 SLC38A7Q9NVC3 462 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 COL16A1Q07092 1604 aaPredicted RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 DLEC1Q9Y238 1755 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 SOWAHBA6NEL2 793 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 TYROBPO43914 113 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 ERVK-10P10266 1014 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 MYL4P12829 197 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 AKAP5P24588 427 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 KPNA1P52294 538 aaPredicted RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 GHRHRQ02643 423 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 SLC25A11Q02978 314 aaKnown RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 GAD2Q05329 585 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 EFCAB3Q8N7B9 438 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 FATE1Q969F0 183 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 MED30Q96HR3 178 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 FAM193BQ96PV7 902 aaPredicted RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 TUBGCP5Q96RT8 1024 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 B3GNT5Q9BYG0 378 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 SDCBP2Q9H190 292 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 CNTN6Q9UQ52 1028 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 AFG3L2Q9Y4W6 797 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 UTRNP46939 3433 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 BTAF1O14981 1849 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 MEI4A8MW99 385 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 TK2O00142 265 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 DCXO43602 365 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 PIP5K1CO60331 668 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 GLAP06280 429 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 CRHR1P34998 444 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 TKTL1P51854 596 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 NRLP54845 237 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 ADAM17P78536 824 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 INO80DQ53TQ3 878 aaPredicted RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 LDLRAD1Q5T700 205 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 DPF3Q92784 378 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 ELMO2Q96JJ3 720 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 CLPTM1LQ96KA5 538 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 LGMNQ99538 433 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 KLHL4Q9C0H6 718 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 PLSCR2Q9NRY7 297 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 ADARB2Q9NS39 739 aaKnown RBP10.55□□□□□ -0.72
LIG1-220ENST00000601091 NMRK1Q9NWW6 199 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 TAS2R1Q9NYW7 299 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 GPRC5DQ9NZD1 345 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 MORF4L1Q9UBU8 362 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 GPSM3Q9Y4H4 160 aa10.55□□□□□ -0.72
LIG1-220ENST00000601091 MPOP05164 745 aa10.54□□□□□ -0.72
LIG1-220ENST00000601091 GOT1P17174 413 aa10.54□□□□□ -0.72
LIG1-220ENST00000601091 CDH5P33151 784 aaPredicted RBP10.54□□□□□ -0.72
LIG1-220ENST00000601091 PTK2BQ14289 1009 aa10.54□□□□□ -0.72
LIG1-220ENST00000601091 Q3ZCU0 254 aa10.54□□□□□ -0.72
LIG1-220ENST00000601091 TEDDM1Q5T9Z0 273 aa10.54□□□□□ -0.72
LIG1-220ENST00000601091 PMF1Q6P1K2 205 aa10.54□□□□□ -0.72
LIG1-220ENST00000601091 BORAQ6PGQ7 559 aa10.54□□□□□ -0.72
LIG1-220ENST00000601091 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
LIG1-220ENST00000601091 RIPOR1Q6ZS17 1223 aa10.54□□□□□ -0.72
LIG1-220ENST00000601091 TDRD5Q8NAT2 981 aaKnown RBP10.54□□□□□ -0.72
LIG1-220ENST00000601091 DNAJC1Q96KC8 554 aaKnown RBP10.54□□□□□ -0.72
LIG1-220ENST00000601091 TEPSINQ96N21 525 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms