RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 TREM1Q9NP99 234 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 NCKAP1Q9Y2A7 1128 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 FGFR3P22607 806 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 NR2C2P49116 596 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 MAPKAPK2P49137 400 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 ZRANB3Q5FWF4 1079 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 KCNT2Q6UVM3 1135 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 BEX2Q9BXY8 128 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 BEX1Q9HBH7 125 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 COMMD3Q9UBI1 195 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 MORF4L1Q9UBU8 362 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CEPT1Q9Y6K0 416 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 XDHP47989 1333 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 EARS2Q5JPH6 523 aaKnown RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 EID3Q8N140 333 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 SLC7A14Q8TBB6 771 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 PCDHAC1Q9H158 963 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CAB39LQ9H9S4 337 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 BCAS2O75934 225 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 GFOD2Q3B7J2 385 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 DCAF4L1Q3SXM0 396 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 EPGNQ6UW88 154 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CYP2U1Q7Z449 544 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CNTD1Q8N815 330 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 NRG4Q8WWG1 115 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 PIGBQ92521 554 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 MTRRQ9UBK8 725 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 EDARQ9UNE0 448 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 ASXL3Q9C0F0 2248 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 UBA6A0AVT1 1052 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 STMND1H3BQB6 276 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 MSH4O15457 936 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 PURAQ00577 322 aaKnown RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 TRIM40Q6P9F5 258 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 FBXO33Q7Z6M2 555 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 ERO1BQ86YB8 467 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 SLC29A1Q99808 456 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 MMP27Q9H306 513 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 ERAP1Q9NZ08 941 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 TRHDEQ9UKU6 1024 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 MAPRE3Q9UPY8 281 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 BOLA1Q9Y3E2 137 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 MGAT4DA6NG13 374 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 TTC34A8MYJ7 566 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 TIMM44O43615 452 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 NR3C2P08235 984 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CRATP43155 626 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 AQP4P55087 323 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 LRRC38Q5VT99 294 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 VANGL1Q8TAA9 524 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 LGALS12Q96DT0 336 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 PRICKLE1Q96MT3 831 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 RHOBTB2Q9BYZ6 727 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 ZYG11BQ9C0D3 744 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 REEP1Q9H902 201 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 ACP6Q9NPH0 428 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 SEMA4BQ9NPR2 832 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF432O94892 652 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CHRNB1P11230 501 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CD36P16671 472 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 PCSK7Q16549 785 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 TMEM139Q8IV31 216 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 ERMAPQ96PL5 475 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 GATA5Q9BWX5 397 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 MRPL4Q9BYD3 311 aaKnown RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 ECE2O60344 883 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 INMTO95050 263 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 IL1R1P14778 569 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CNTFP26441 200 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 SDC2P34741 201 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 C6orf141Q5SZD1 244 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 SFRP4Q6FHJ7 346 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 MFSD5Q6N075 450 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 SLFN11Q7Z7L1 901 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 DPP9Q86TI2 863 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 KBTBD8Q8NFY9 601 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 ADAMTS10Q9H324 1103 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CLEC4AQ9UMR7 237 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 FUOMA2VDF0 154 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 DNAJA2O60884 412 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 RFPL1O75677 317 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 PPM1BO75688 479 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 UMPSP11172 480 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 GRIK1P39086 918 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 WSCD2Q2TBF2 565 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 SLC2A7Q6PXP3 512 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CHSY3Q70JA7 882 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 SPAG16Q8N0X2 631 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CDYL2Q8N8U2 506 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 REEP2Q9BRK0 252 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 CBWD1Q9BRT8 395 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 FUNDC2Q9BWH2 189 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 PAQR5Q9NXK6 330 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-248ENST00000558190 RAPGEFL1Q9UHV5 662 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 RAB23Q9ULC3 237 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 LOC102724428A0A0B4J2F2 783 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 NOBOXO60393 691 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 UBXN7O94888 489 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 MYL4P12829 197 aa3.72□□□□□ -1.81
ATXN3-248ENST00000558190 ITGA1P56199 1179 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms