RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 PDPK2PQ6A1A2 396 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 METTL23Q86XA0 190 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 ZNF354CQ86Y25 554 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 ACMSDQ8TDX5 336 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 SH3RF2Q8TEC5 729 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 PGAP3Q96FM1 320 aaPredicted RBP14.97□□□□□ -0.01
DDX55-209ENST00000542286 PLEKHG4BQ96PX9 1271 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 ACBD6Q9BR61 282 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 NAT9Q9BTE0 207 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 NMRAL1Q9HBL8 299 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 RBM22Q9NW64 420 aaKnown RBP eCLIP14.97□□□□□ -0.013e-13■■■■■ 30.2
DDX55-209ENST00000542286 TDRD15B5MCY1 1934 aaKnown RBP14.97□□□□□ -0.01
DDX55-209ENST00000542286 UNCXA6NJT0 531 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 CNTN5O94779 1100 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 CPOXP36551 454 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 SERPINB5P36952 375 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 TCHHL1Q5QJ38 904 aaPredicted RBP14.97□□□□□ -0.01
DDX55-209ENST00000542286 ARTNQ5T4W7 220 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 DENND5AQ6IQ26 1287 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 RTN4RL1Q86UN2 441 aaPredicted RBP14.97□□□□□ -0.01
DDX55-209ENST00000542286 MIB1Q86YT6 1006 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 TMPRSS6Q8IU80 811 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 SPATA2LQ8IUW3 424 aaPredicted RBP14.97□□□□□ -0.01
DDX55-209ENST00000542286 ST13P4Q8IZP2 240 aaPredicted RBP14.97□□□□□ -0.01
DDX55-209ENST00000542286 ARHGAP24Q8N264 748 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 PYDC1Q8WXC3 89 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 PPM1HQ9ULR3 514 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 HS3ST4Q9Y661 456 aa14.97□□□□□ -0.01
DDX55-209ENST00000542286 J3KR12 359 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 SERPINB6P35237 376 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 ATXN3P54252 364 aaPredicted RBP14.96□□□□□ -0.01
DDX55-209ENST00000542286 NAGLUP54802 743 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 ITKQ08881 620 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 CDH17Q12864 832 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 DLG1Q12959 904 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 C1orf146Q5VVC0 180 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 DCLRE1AQ6PJP8 1040 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 FRMD7Q6ZUT3 714 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 SAPCD2Q86UD0 394 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 ZC3HC1Q86WB0 502 aaKnown RBP14.96□□□□□ -0.01
DDX55-209ENST00000542286 SNX31Q8N9S9 440 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 ATAD1Q8NBU5 361 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 TBL1YQ9BQ87 522 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 TRPV6Q9H1D0 765 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 SOX13Q9UN79 622 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 RUVBL2Q9Y230 463 aaKnown RBP14.96□□□□□ -0.01
DDX55-209ENST00000542286 ACTL7AQ9Y615 435 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 A0A0U1RQF3 1178 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 F8W8V4 182 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 F9P00740 461 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 IGHA2P01877 340 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 CRABP2P29373 138 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 ETFBP38117 255 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 RAP1GDS1P52306 607 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 PTPRCAPQ14761 206 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 ITPRIPL1Q6GPH6 555 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 NAT14Q8WUY8 206 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 PPP2R3CQ969Q6 453 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 NXNL1Q96CM4 212 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 NUF2Q9BZD4 464 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 NDE1Q9NXR1 346 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 TBC1D30Q9Y2I9 924 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 SLC27A5Q9Y2P5 690 aa14.96□□□□□ -0.01
DDX55-209ENST00000542286 NYNRINQ9P2P1 1898 aaKnown RBP14.96□□□□□ -0.01
DDX55-209ENST00000542286 A0A088AWK7 358 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 SLC35E2BP0CK96 405 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 HAPLN1P10915 354 aaPredicted RBP14.96□□□□□ -0.02
DDX55-209ENST00000542286 MAGEA8P43361 318 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 OR1G1P47890 313 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 HCAR3P49019 387 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 GATMP50440 423 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 CDC16Q13042 620 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 TUSC3Q13454 348 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 ALFQ53S48 1182 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 RBM20Q5T481 1227 aaKnown RBP14.96□□□□□ -0.02
DDX55-209ENST00000542286 PIK3R6Q5UE93 754 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 SPATA24Q86W54 205 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 CENPLQ8N0S6 344 aaPredicted RBP14.96□□□□□ -0.02
DDX55-209ENST00000542286 TMEM151AQ8N4L1 468 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 TDRD5Q8NAT2 981 aaKnown RBP14.96□□□□□ -0.02
DDX55-209ENST00000542286 KLHDC9Q8NEP7 349 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 APBB2Q92870 758 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 PABPC5Q96DU9 382 aaKnown RBP14.96□□□□□ -0.02
DDX55-209ENST00000542286 MYEOVQ96EZ4 313 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 ACE2Q9BYF1 805 aaPredicted RBP14.96□□□□□ -0.02
DDX55-209ENST00000542286 IL22Q9GZX6 179 aa14.96□□□□□ -0.02
DDX55-209ENST00000542286 OR51F1A6NGY5 319 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 HNRNPRO43390 633 aaKnown RBP14.95□□□□□ -0.02
DDX55-209ENST00000542286 ADAMTS4O75173 837 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 PABPC4LP0CB38 370 aaKnown RBP14.95□□□□□ -0.02
DDX55-209ENST00000542286 TPP2P29144 1249 aaPredicted RBP14.95□□□□□ -0.02
DDX55-209ENST00000542286 RPL9P32969 192 aaKnown RBP14.95□□□□□ -0.02
DDX55-209ENST00000542286 SLC1A2P43004 574 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 MAGEA12P43365 314 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 PLK1P53350 603 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 YWHAHQ04917 246 aaPredicted RBP14.95□□□□□ -0.02
DDX55-209ENST00000542286 CLEC14AQ86T13 490 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 CCNYL1Q8N7R7 359 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 EBF3Q9H4W6 596 aa14.95□□□□□ -0.02
DDX55-209ENST00000542286 GLOD4Q9HC38 313 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms