RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 PDZD2O15018 2839 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 EFCAB7A8K855 629 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 K7ERQ8 282 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 APOEP02649 317 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 ALPIP09923 528 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 TRIM49P0CI25 452 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 TRIM49CP0CI26 452 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 CASP1P29466 404 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 VAMP7P51809 220 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 YPEL5P62699 121 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 PPARDQ03181 441 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 TCEA2Q15560 299 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 DEFB109BQ30KR1 87 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 ZC3H12AQ5D1E8 599 aaKnown RBP14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 TTC39BQ5VTQ0 682 aaPredicted RBP14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 TAC4Q86UU9 113 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 BTN2A3PQ96KV6 586 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 TAAR9Q96RI9 348 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 CUEDC2Q9H467 287 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 AKAP7Q9P0M2 348 aaPredicted RBP14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 IL36AQ9UHA7 158 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 VPS28Q9UK41 221 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 WASF2Q9Y6W5 498 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 PRRC2CQ9Y520 2896 aaKnown RBP14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 HIVEP1P15822 2718 aa14.13□□□□□ -0.15
NKX3-1-202ENST00000523261 MTORP42345 2549 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 O00370 1275 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 SMAD6O43541 496 aaKnown RBP14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 RAD1O60671 282 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 LEFTY1O75610 366 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 CD2BP2O95400 341 aaKnown RBP14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 NR3C1P04150 777 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 FGF3P11487 239 aaPredicted RBP14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 GLB1P16278 677 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 IGFALSP35858 605 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 CENPCQ03188 943 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 SEPT6Q14141 434 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 CERCAMQ5T4B2 595 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 CEP135Q66GS9 1140 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 TCTN3Q6NUS6 607 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 PMF1Q6P1K2 205 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 ATP11CQ8NB49 1132 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 CPT1CQ8TCG5 803 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 SLC35F5Q8WV83 523 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 SEMA4DQ92854 862 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 CENPTQ96BT3 561 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 EEF2KMTQ96G04 330 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 EDEM3Q9BZQ6 932 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 KCTD10Q9H3F6 313 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 GGT7Q9UJ14 662 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 B3GALT1Q9Y5Z6 326 aa14.12□□□□□ -0.15
NKX3-1-202ENST00000523261 SNAP91O60641 907 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 CD19P15391 556 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 PNLIPP16233 465 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 RRM1P23921 792 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 L1CAMP32004 1257 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 EIF4A3P38919 411 aaKnown RBP14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 BLKP51451 505 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 IRAK1P51617 712 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 HK3P52790 923 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 CEBPZQ03701 1054 aaKnown RBP14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 ARHGAP44Q17R89 818 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 RABGAP1LQ5R372 815 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 DPY19L3Q6ZPD9 716 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 HID1Q8IV36 788 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 MMRN2Q9H8L6 949 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 GPN2Q9H9Y4 310 aaPredicted RBP14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 RDH14Q9HBH5 336 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 CASS4Q9NQ75 786 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 DONSONQ9NYP3 566 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 MORC2Q9Y6X9 1032 aaPredicted RBP14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 LRP4O75096 1905 aa14.11□□□□□ -0.15
NKX3-1-202ENST00000523261 TTLL8A6PVC2 850 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 KCNU1A8MYU2 1149 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 HGSO14964 777 aaPredicted RBP14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 TSPAN6O43657 245 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 CTSEP14091 401 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 MAP9Q49MG5 647 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 SYPL2Q5VXT5 272 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 FBXL22Q6P050 247 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 ASB18Q6ZVZ8 466 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 PARS2Q7L3T8 475 aaKnown RBP14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 GKN2Q86XP6 184 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 RCBTB1Q8NDN9 531 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 TSACCQ96A04 125 aaPredicted RBP14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 DHX58Q96C10 678 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 PSMB7Q99436 277 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 BLZF1Q9H2G9 400 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 TNKS2Q9H2K2 1166 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 TMEM8AQ9HCN3 771 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 VPS51Q9UID3 782 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 FRMD4BQ9Y2L6 1034 aa14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 ZNF106Q9H2Y7 1883 aaKnown RBP14.1□□□□□ -0.15
NKX3-1-202ENST00000523261 PVALEFA0A1B0GWK0 134 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 MKRN2OSH3BPM6 223 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 PDXKO00764 312 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 MAPK13O15264 365 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 EIF5BO60841 1220 aaKnown RBP14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 FBXO21O94952 628 aa14.09□□□□□ -0.15
NKX3-1-202ENST00000523261 CPNE6O95741 557 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms