RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SPRP35270 261 aaPredicted RBP17.06■□□□□ 0.32
SREK1-212ENST00000522912 ARCN1P48444 511 aaKnown RBP17.06■□□□□ 0.32
SREK1-212ENST00000522912 LIMK2P53671 638 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 TMEM240Q5SV17 173 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 GAREM2Q75VX8 874 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 OTOAQ7RTW8 1153 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 HS6ST3Q8IZP7 471 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 OTUD6BQ8N6M0 293 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 CCT6BQ92526 530 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 ATXN7L3BQ96GX2 97 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 SEMA3CQ99985 751 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 SPON2Q9BUD6 331 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 LRRC3Q9BY71 257 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 TREX1Q9NSU2 369 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 SSX2IPQ9Y2D8 614 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 MTO1Q9Y2Z2 717 aaKnown RBP17.06■□□□□ 0.32
SREK1-212ENST00000522912 ASB3Q9Y575 518 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 DOCK6Q96HP0 2047 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.06■□□□□ 0.32
SREK1-212ENST00000522912 A0A1B0GVM2 712 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 ILVBLA1L0T0 632 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 TCAF2A6NFQ2 919 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 KDELR3O43731 214 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 RHOCP08134 193 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 HDCP19113 662 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 EN2P19622 333 aaPredicted RBP17.06■□□□□ 0.32
SREK1-212ENST00000522912 BGNP21810 368 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 GABRR2P28476 465 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 CYP4F8P98187 520 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 FPGSQ05932 587 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 ZNF177Q13360 481 aaPredicted RBP17.06■□□□□ 0.32
SREK1-212ENST00000522912 ZNF235Q14590 738 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 SPRED3Q2MJR0 410 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 PABPC1LQ4VXU2 614 aaKnown RBP17.06■□□□□ 0.32
SREK1-212ENST00000522912 PPM1JQ5JR12 505 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 FSTL4Q6MZW2 842 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 TMC7Q7Z402 723 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 TMC8Q8IU68 726 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 HERC6Q8IVU3 1022 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 CCDC63Q8NA47 563 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 ISL2Q96A47 359 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 MECRQ9BV79 373 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 POLR1EQ9GZS1 481 aaKnown RBP17.06■□□□□ 0.32
SREK1-212ENST00000522912 TBC1D30Q9Y2I9 924 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 ARL2BPQ9Y2Y0 163 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 LCHNA4D1U4 455 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 NRG2O14511 850 aaPredicted RBP17.05■□□□□ 0.32
SREK1-212ENST00000522912 VAPBO95292 243 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 GMPRP36959 345 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 MAGEA12P43365 314 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 SERPINH1P50454 418 aaKnown RBP17.05■□□□□ 0.32
SREK1-212ENST00000522912 CSE1LP55060 971 aaKnown RBP17.05■□□□□ 0.32
SREK1-212ENST00000522912 OXCT1P55809 520 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 ERVFC1P60507 584 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 SEPT6Q14141 434 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 CNGA3Q16281 694 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 SIRPB2Q5JXA9 342 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 CXorf57Q6NSI4 855 aaKnown RBP17.05■□□□□ 0.32
SREK1-212ENST00000522912 CCDC121Q6ZUS5 278 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 CMC1Q7Z7K0 106 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 THOC1Q96FV9 657 aaKnown RBP17.05■□□□□ 0.32
SREK1-212ENST00000522912 SNX15Q9NRS6 342 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 EMCNQ9ULC0 261 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 CPQQ9Y646 472 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 BPTFQ12830 3046 aa17.05■□□□□ 0.32
SREK1-212ENST00000522912 LOC285095A0A1B0GVY8 99 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 ATXN1LP0C7T5 689 aaKnown RBP17.04■□□□□ 0.32
SREK1-212ENST00000522912 TYK2P29597 1187 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 C1QTNF8P60827 252 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 ALG1LQ6GMV1 187 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 C16orf46Q6P387 395 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 Q6ZNB5 142 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 SETD3Q86TU7 594 aaPredicted RBP17.04■□□□□ 0.32
SREK1-212ENST00000522912 ACVR1CQ8NER5 493 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 DDX50Q9BQ39 737 aaKnown RBP17.04■□□□□ 0.32
SREK1-212ENST00000522912 ACE2Q9BYF1 805 aaPredicted RBP17.04■□□□□ 0.32
SREK1-212ENST00000522912 UBA2Q9UBT2 640 aaPredicted RBP17.04■□□□□ 0.32
SREK1-212ENST00000522912 MTCL1Q9Y4B5 1905 aaKnown RBP17.04■□□□□ 0.32
SREK1-212ENST00000522912 CSPG5O95196 566 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 LATS1O95835 1130 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 LRG1P02750 347 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 C8AP07357 584 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 GABRB3P28472 473 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 RNF219Q5W0B1 726 aaPredicted RBP17.04■□□□□ 0.32
SREK1-212ENST00000522912 CNTN4Q8IWV2 1026 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 KREMEN2Q8NCW0 462 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
SREK1-212ENST00000522912 VPS39Q96JC1 886 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 NSMCE3Q96MG7 304 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 RANBP9Q96S59 729 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 ABCF3Q9NUQ8 709 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 PRKAG2Q9UGJ0 569 aa17.04■□□□□ 0.32
SREK1-212ENST00000522912 HEATR9A2RTY3 570 aa17.03■□□□□ 0.32
SREK1-212ENST00000522912 GFRA2O00451 464 aa17.03■□□□□ 0.32
SREK1-212ENST00000522912 TBL1XO60907 577 aa17.03■□□□□ 0.32
SREK1-212ENST00000522912 GSRP00390 522 aa17.03■□□□□ 0.32
SREK1-212ENST00000522912 ADH1AP07327 375 aa17.03■□□□□ 0.32
SREK1-212ENST00000522912 RGRP47804 291 aa17.03■□□□□ 0.32
SREK1-212ENST00000522912 STXBP5Q5T5C0 1151 aa17.03■□□□□ 0.32
SREK1-212ENST00000522912 N4BP2L1Q5TBK1 243 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms