RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 GPR179Q6PRD1 2367 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 KRIT1O00522 736 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 MUSKO15146 869 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 INSIG1O15503 277 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 DDX3YO15523 660 aaKnown RBP13.74□□□□□ -0.21
COL1A1-208ENST00000494334 GFRA3O60609 400 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 CST8O60676 142 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 EPN2O95208 641 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 MX2P20592 715 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 CCNCP24863 283 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 DYNLT1P63172 113 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 ZNF33AQ06730 810 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 NSUN2Q08J23 767 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL1A1-208ENST00000494334 CNTN1Q12860 1018 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 TFDP2Q14188 446 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 NPNTQ6UXI9 565 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 ARMCX6Q7L4S7 300 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 ALYREFQ86V81 257 aaKnown RBP13.74□□□□□ -0.21
COL1A1-208ENST00000494334 CCDC50Q8IVM0 306 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 DCLK2Q8N568 766 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 CADM4Q8NFZ8 388 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 NSMCE1Q8WV22 266 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 RUBCNQ92622 972 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 ALG3Q92685 438 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 LRIG1Q96JA1 1093 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 TSGA13Q96PP4 275 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 PSKH2Q96QS6 385 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 ARRDC1-AS1Q9H2J1 176 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 C6orf106Q9H6K1 298 aaPredicted RBP13.74□□□□□ -0.21
COL1A1-208ENST00000494334 NCDNQ9UBB6 729 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 SEPT3Q9UH03 358 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 HEY1Q9Y5J3 304 aa13.74□□□□□ -0.21
COL1A1-208ENST00000494334 METTL12A8MUP2 240 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 MIF4GDA9UHW6 222 aaKnown RBP13.73□□□□□ -0.21
COL1A1-208ENST00000494334 MATN3O15232 486 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 SEMA4FO95754 770 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 PYGMP11217 842 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 CSNK1DP48730 415 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 RENBPP51606 427 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 COPS2P61201 443 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 CREB5Q02930 508 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 RAD51Q06609 339 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 HNRNPDQ14103 355 aaKnown RBP13.73□□□□□ -0.21
COL1A1-208ENST00000494334 PPP2R5EQ16537 467 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 PIP5KL1Q5T9C9 394 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 MARC1Q5VT66 337 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 AGBL4Q5VU57 503 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 LYSMD4Q5XG99 296 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 TIGD7Q6NT04 549 aaPredicted RBP13.73□□□□□ -0.21
COL1A1-208ENST00000494334 PGBD5Q8N414 524 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 TEX26Q8N6G2 289 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 OR14C36Q8NHC7 312 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 MAML1Q92585 1016 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 FOXJ1Q92949 421 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 HDAC11Q96DB2 347 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 HES6Q96HZ4 224 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 PPP1R16AQ96I34 528 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 HSPA12BQ96MM6 686 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 OLFM3Q96PB7 478 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 LGMNQ99538 433 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 HERPUD2Q9BSE4 406 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 HEMGNQ9BXL5 484 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 CPEB1Q9BZB8 566 aaKnown RBP13.73□□□□□ -0.21
COL1A1-208ENST00000494334 DYRK4Q9NR20 520 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 SAE1Q9UBE0 346 aaPredicted RBP13.73□□□□□ -0.21
COL1A1-208ENST00000494334 PCDHGA5Q9Y5G8 931 aa13.73□□□□□ -0.21
COL1A1-208ENST00000494334 NYNRINQ9P2P1 1898 aaKnown RBP13.73□□□□□ -0.21
COL1A1-208ENST00000494334 SDK1Q7Z5N4 2213 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 BCLAF3A2AJT9 711 aaKnown RBP13.72□□□□□ -0.21
COL1A1-208ENST00000494334 FAM47DPA6NHR8 397 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 SLC7A4O43246 635 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 PLRG1O43660 514 aaKnown RBP13.72□□□□□ -0.21
COL1A1-208ENST00000494334 GJB3O75712 270 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 UGT2B4P06133 528 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 TGM2P21980 687 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 ITPKAP23677 461 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 ITGB7P26010 798 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 MMP13P45452 471 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 NR2C2P49116 596 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 SCNN1BP51168 640 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 ADPRHP54922 357 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 TAS2R38P59533 333 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 PPIDQ08752 370 aaKnown RBP13.72□□□□□ -0.21
COL1A1-208ENST00000494334 ZNF235Q14590 738 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 ZNF805Q5CZA5 627 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 DCAF12L1Q5VU92 463 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 AADACL2Q6P093 401 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 NCEH1Q6PIU2 408 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 GDPD4Q6W3E5 623 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 ERN2Q76MJ5 926 aaKnown RBP13.72□□□□□ -0.21
COL1A1-208ENST00000494334 SRLQ86TD4 932 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 CCDC13Q8IYE1 715 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 BBS5Q8N3I7 341 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 UBL4BQ8N7F7 174 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 CCNYQ8ND76 341 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 FATE1Q969F0 183 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 NSMCE3Q96MG7 304 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 KLHL32Q96NJ5 620 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 OSBPL1AQ9BXW6 950 aa13.72□□□□□ -0.21
COL1A1-208ENST00000494334 HDAC8Q9BY41 377 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms