RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 HIC2Q96JB3 615 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 C1orf74Q96LT6 269 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 Q96MF0 132 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 HS6ST2Q96MM7 605 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 ADPGKQ9BRR6 497 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 HEMGNQ9BXL5 484 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 POLR1BQ9H9Y6 1135 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 Q9N2J8 555 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 TXNRD2Q9NNW7 524 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 SNTG1Q9NSN8 517 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 FBXO40Q9UH90 709 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 A4GNTQ9UNA3 340 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 MTMR6Q9Y217 621 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 CLDN16Q9Y5I7 305 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 SESN1Q9Y6P5 492 aa4.77□□□□□ -1.65
VPS13A-211ENST00000484581 ARHGAP10A1A4S6 786 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 GLOD5A6NK44 160 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 KCNJ18B7U540 433 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 TTLL1O95922 423 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 SERPINC1P01008 464 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 EBLN1P0CF75 366 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 SAT1P21673 171 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 TBXAS1P24557 533 aaPredicted RBP4.76□□□□□ -1.65
VPS13A-211ENST00000484581 PTPN9P43378 593 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 GABRB2P47870 512 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 VPS41P49754 854 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 COPB1P53618 953 aaKnown RBP4.76□□□□□ -1.65
VPS13A-211ENST00000484581 RHAGQ02094 409 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 CYP4A11Q02928 519 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 PRPF4BQ13523 1007 aaKnown RBP4.76□□□□□ -1.65
VPS13A-211ENST00000484581 SCARB2Q14108 478 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 RPE65Q16518 533 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 NTRK2Q16620 822 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 KYNUQ16719 465 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 FBXO43Q4G163 708 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 SERTAD4-AS1Q5TG53 156 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 FAM171A1Q5VUB5 890 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 TXNDC8Q6A555 127 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 IL20RBQ6UXL0 311 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 TTC30BQ8N4P2 665 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 BOLLQ8N9W6 283 aaKnown RBP4.76□□□□□ -1.65
VPS13A-211ENST00000484581 DNAAF1Q8NEP3 725 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 SPATA17Q96L03 361 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 WDFY2Q96P53 400 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 FRG2BQ96QU4 278 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 H2AFJQ9BTM1 129 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 CIPCQ9C0C6 399 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 SIL1Q9H173 461 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 ZWILCHQ9H900 591 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 SLC35C2Q9NQQ7 365 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 GIMAP4Q9NUV9 329 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 MRGBPQ9NV56 204 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 ZNF112Q9UJU3 913 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 TLK1Q9UKI8 766 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 DHDHQ9UQ10 334 aa4.76□□□□□ -1.65
VPS13A-211ENST00000484581 AOX1Q06278 1338 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 A8MV72 311 aaPredicted RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 CLIC1O00299 241 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 SCAMP1O15126 338 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 SEC31AO94979 1220 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 IPO7O95373 1038 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 MT-CO3P00414 261 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 RB1P06400 928 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 ENO1P06733 434 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 HEXAP06865 529 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 HOXB5P09067 269 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 PRR35P0CG20 571 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 IRF1P10914 325 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 ATF7P17544 494 aaPredicted RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 SLC15A1P46059 708 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 PTH2RP49190 550 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 HSD17B4P51659 736 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 MRPL12P52815 198 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 RAD23AP54725 363 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 ZBTB16Q05516 673 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 AIMP1Q12904 312 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 MYBPC2Q14324 1141 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 FRG1Q14331 258 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 KCNB1Q14721 858 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 LARS2Q15031 903 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 EDRF1Q3B7T1 1238 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 GKAP1Q5VSY0 366 aaPredicted RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 KAZNQ674X7 775 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 ZNF474Q6S9Z5 364 aaPredicted RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 DCDC5Q6ZRR9 648 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 PRSS45Q7RTY3 260 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 GALNTL5Q7Z4T8 443 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 BCDIN3DQ7Z5W3 292 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 PEG10Q86TG7 708 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 GALNT13Q8IUC8 556 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 TEX11Q8IYF3 940 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 SLC44A3Q8N4M1 653 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 PAQR4Q8N4S7 273 aaPredicted RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 POC5Q8NA72 575 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 POMGNT2Q8NAT1 580 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 OR52N4Q8NGI2 321 aa4.75□□□□□ -1.65
VPS13A-211ENST00000484581 PRPF31Q8WWY3 499 aaKnown RBP4.75□□□□□ -1.65
VPS13A-211ENST00000484581 PSPC1Q8WXF1 523 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms