RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 HLA-FP30511 346 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 WASP42768 502 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 PAPOLAP51003 745 aaKnown RBP13.5□□□□□ -0.25
BRAT1-205ENST00000473879 DRG2P55039 364 aaKnown RBP13.5□□□□□ -0.25
BRAT1-205ENST00000473879 GDF10P55107 478 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 NAA30Q147X3 362 aaPredicted RBP13.5□□□□□ -0.25
BRAT1-205ENST00000473879 PLK5Q496M5 336 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 TMEM215Q68D42 235 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 DUPD1Q68J44 220 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 MFN1Q8IWA4 741 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 CARNMT1Q8N4J0 409 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 EIF1ADQ8N9N8 165 aaKnown RBP13.5□□□□□ -0.25
BRAT1-205ENST00000473879 WFDC5Q8TCV5 224 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 NSMCE1Q8WV22 266 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 SEC14L1Q92503 715 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 FATE1Q969F0 183 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 LRRC45Q96CN5 670 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 HMCESQ96FZ2 354 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 SNF8Q96H20 258 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 VAT1Q99536 393 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 DUSP15Q9H1R2 295 aaPredicted RBP13.5□□□□□ -0.25
BRAT1-205ENST00000473879 NOL6Q9H6R4 1146 aaKnown RBP13.5□□□□□ -0.25
BRAT1-205ENST00000473879 SP110Q9HB58 689 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 USP29Q9HBJ7 922 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 GDF3Q9NR23 364 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 TBC1D30Q9Y2I9 924 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 STON1Q9Y6Q2 735 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 PLXND1Q9Y4D7 1925 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 DMXL1Q9Y485 3027 aa13.5□□□□□ -0.25
BRAT1-205ENST00000473879 ZNF292O60281 2723 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 GPR179Q6PRD1 2367 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 C5orf60A6NFR6 353 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 BHMG1C9JSJ3 638 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-205ENST00000473879 RNF103O00237 685 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 MAFKO60675 156 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 OPHN1O60890 802 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 GCATO75600 419 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 NEBLO76041 1014 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 RHOBTB1O94844 696 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 EPN2O95208 641 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 GABRG2P18507 467 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 ADCY8P40145 1251 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 P2RY2P41231 377 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 GNA12Q03113 381 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 CALCOCO2Q13137 446 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 TRIP13Q15645 432 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-205ENST00000473879 KIAA1211LQ6NV74 962 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 ARHGEF18Q6ZSZ5 1173 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 PCGF5Q86SE9 256 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 TP53INP2Q8IXH6 220 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 AHI1Q8N157 1196 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 NETO2Q8NC67 525 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 FIBINQ8TAL6 211 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 HMGB4Q8WW32 186 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 PARD6BQ9BYG5 372 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 TRIM31Q9BZY9 425 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 MUC3BQ9H195 1237 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 DPH5Q9H2P9 285 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 C10orf88Q9H8K7 445 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 ABCB8Q9NUT2 735 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 HAUS2Q9NVX0 235 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 ARGLU1Q9NWB6 273 aaPredicted RBP13.49□□□□□ -0.25
BRAT1-205ENST00000473879 CACNA2D2Q9NY47 1150 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 SEPT10Q9P0V9 454 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 BCCIPQ9P287 314 aaKnown RBP eCLIP13.49□□□□□ -0.25
BRAT1-205ENST00000473879 IPO11Q9UI26 975 aaKnown RBP13.49□□□□□ -0.25
BRAT1-205ENST00000473879 GGA2Q9UJY4 613 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 TRHDEQ9UKU6 1024 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 RAB21Q9UL25 225 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 HPCAL4Q9UM19 191 aa13.49□□□□□ -0.25
BRAT1-205ENST00000473879 SPTBN4Q9H254 2564 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 ZSCAN5CA6NGD5 496 aaPredicted RBP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 WASH3PC4AMC7 463 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 MATN3O15232 486 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 ZBTB24O43167 697 aaPredicted RBP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 ERLIN1O75477 346 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 PABPC1P11940 636 aaKnown RBP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 IL12RB1P42701 662 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 RPL21P46778 160 aaKnown RBP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 VPS41P49754 854 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 CLCN6P51797 869 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 IFI35P80217 286 aaPredicted RBP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 CAV1Q03135 178 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 IL10RBQ08334 325 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 SPEM2Q0P670 501 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 GPS1Q13098 491 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 SERINC3Q13530 473 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 SLC12A1Q13621 1099 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 HLTFQ14527 1009 aaKnown RBP eCLIP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 ZNF234Q14588 700 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 MAP9Q49MG5 647 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 IL31Q6EBC2 164 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 ITPRIPL1Q6GPH6 555 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 CXorf57Q6NSI4 855 aaKnown RBP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 B4GALNT4Q76KP1 1039 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 ADIPOR2Q86V24 386 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 PGBD3Q8N328 593 aa13.48□□□□□ -0.25
BRAT1-205ENST00000473879 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.48□□□□□ -0.25
BRAT1-205ENST00000473879 ARHGEF2Q92974 986 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 388.1 ms