RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 CFHP08603 1231 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 PIRTP0C851 137 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 FASTKQ14296 549 aaKnown RBP13.93□□□□□ -0.18
BRAT1-203ENST00000467558 ACOX1Q15067 660 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 PFKFB4Q16877 469 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 TAPT1Q6NXT6 567 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 CLEC20AQ6ZU45 233 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 MILR1Q7Z6M3 343 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 SLC35B2Q8TB61 432 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 SUSD6Q92537 303 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 TMEM237Q96Q45 408 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 AGO3Q9H9G7 860 aaKnown RBP13.93□□□□□ -0.18
BRAT1-203ENST00000467558 FZD10Q9ULW2 581 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 NR2E3Q9Y5X4 410 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 C16orf96A6NNT2 1141 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 A8MX80 341 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 SNUPNO95149 360 aaKnown RBP13.93□□□□□ -0.18
BRAT1-203ENST00000467558 SLC2A4P14672 509 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 PRIM2P49643 509 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 MRPS35P82673 323 aaKnown RBP13.93□□□□□ -0.18
BRAT1-203ENST00000467558 FNBP1LQ5T0N5 605 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 ANKRD22Q5VYY1 191 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 GDF6Q6KF10 455 aaPredicted RBP13.93□□□□□ -0.18
BRAT1-203ENST00000467558 ARMC6Q6NXE6 501 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 FBXL19Q6PCT2 694 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 CFAP52Q8N1V2 620 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 C16orf70Q9BSU1 422 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 HGH1Q9BTY7 390 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 YIPF3Q9GZM5 350 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 GBA3Q9H227 469 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 SIX4Q9UIU6 781 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 PCDHB9Q9Y5E1 797 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 FAM237BA0A1B0GVD1 139 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 KCNU1A8MYU2 1149 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 MYO1GB0I1T2 1018 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 ZBTB14O43829 449 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 FSBPO95073 299 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 SOAT1P35610 550 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 INCA1Q0VD86 236 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 ZNF618Q5T7W0 954 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 TRMT11Q7Z4G4 463 aaKnown RBP13.93□□□□□ -0.18
BRAT1-203ENST00000467558 OOSP2Q86WS3 158 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 FNDC5Q8NAU1 212 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 PTCD2Q8WV60 388 aaKnown RBP13.93□□□□□ -0.18
BRAT1-203ENST00000467558 KCTD4Q8WVF5 259 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 SPATA17Q96L03 361 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 SLC25A23Q9BV35 468 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 RAD18Q9NS91 495 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 DTLQ9NZJ0 730 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 STK39Q9UEW8 545 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 EDF1O60869 148 aaKnown RBP13.93□□□□□ -0.18
BRAT1-203ENST00000467558 ALOX15P16050 662 aaPredicted RBP13.93□□□□□ -0.18
BRAT1-203ENST00000467558 CHRNB3Q05901 458 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 FASTKD3Q14CZ7 662 aaKnown RBP13.93□□□□□ -0.18
BRAT1-203ENST00000467558 FNDC3BQ53EP0 1204 aaKnown RBP13.93□□□□□ -0.18
BRAT1-203ENST00000467558 WLSQ5T9L3 541 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 SH3PXD2AQ5TCZ1 1133 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 SYTL1Q8IYJ3 562 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 ZNF567Q8N184 647 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 CLEC4CQ8WTT0 213 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 NTAN1Q96AB6 310 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 ZNF556Q9HAH1 456 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 OPTCQ9UBM4 332 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 CROTQ9UKG9 612 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 VWA7Q9Y334 891 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 V9GYQ6 96 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 PLCH1Q4KWH8 1693 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 HNRNPRO43390 633 aaKnown RBP13.92□□□□□ -0.18
BRAT1-203ENST00000467558 STAU1O95793 577 aaKnown RBP13.92□□□□□ -0.18
BRAT1-203ENST00000467558 TACR2P21452 398 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 GRK3P35626 688 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 INPP1P49441 399 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 NAA20P61599 178 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 ADGRD1Q6QNK2 874 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 MAMDC4Q6UXC1 1216 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 NDNQ99608 321 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 DPY30Q9C005 99 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 ADNPQ9H2P0 1102 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 OSGEPL1Q9H4B0 414 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 CD248Q9HCU0 757 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 NDUFAF1Q9Y375 327 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 PDE4DIPQ5VU43 2346 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 GNG14A0A1W2PPG7 69 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 TBC1D3BA6NDS4 549 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 PPEF2O14830 753 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 TLL1O43897 1013 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 TBC1D4O60343 1298 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 CAPN15O75808 1086 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 GRIA4P48058 902 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 DSG1Q02413 1049 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 SETMARQ53H47 684 aaPredicted RBP13.92□□□□□ -0.18
BRAT1-203ENST00000467558 DCAF12L1Q5VU92 463 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 SMYD5Q6GMV2 418 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 SNX32Q86XE0 403 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 OR4L1Q8NH43 312 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 C2orf15Q8WU43 125 aaKnown RBP13.92□□□□□ -0.18
BRAT1-203ENST00000467558 CYGBQ8WWM9 190 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 HBS1LQ9Y450 684 aaKnown RBP13.92□□□□□ -0.18
BRAT1-203ENST00000467558 TAF1P21675 1872 aa13.92□□□□□ -0.18
BRAT1-203ENST00000467558 C1orf232A0A0U1RR37 186 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms