RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 RABIFP47224 123 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 DUSP3P51452 185 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-219ENST00000440240 SNRPD1P62314 119 aaKnown RBP21.1■□□□□ 0.97
CPNE1-219ENST00000440240 C15orf59Q2T9L4 293 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-219ENST00000440240 ZNF805Q5CZA5 627 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 KYAT3Q6YP21 454 aaKnown RBP21.1■□□□□ 0.97
CPNE1-219ENST00000440240 TMC6Q7Z403 805 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 NLRP14Q86W24 1093 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 FAM181AQ8N9Y4 354 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 SLC30A5Q8TAD4 765 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 ASB12Q8WXK4 309 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 CENPIQ92674 756 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-219ENST00000440240 FGF11Q92914 225 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 ARHGEF26Q96DR7 871 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 C11orf70Q9BRQ4 267 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 C1QTNF2Q9BXJ5 285 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 GPR27Q9NS67 375 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 FAM207AQ9NSI2 230 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-219ENST00000440240 NDFIP2Q9NV92 336 aa21.1■□□□□ 0.97
CPNE1-219ENST00000440240 EIF4E1BA6NMX2 242 aaKnown RBP21.09■□□□□ 0.97
CPNE1-219ENST00000440240 C16orf96A6NNT2 1141 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 NEMP1O14524 444 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 TLX3O43711 291 aaPredicted RBP21.09■□□□□ 0.97
CPNE1-219ENST00000440240 RAMP2O60895 175 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 LRIG2O94898 1065 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 GSRP00390 522 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 GP1BAP07359 652 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 PLEKP08567 350 aaPredicted RBP21.09■□□□□ 0.97
CPNE1-219ENST00000440240 KRT3P12035 628 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 ACTN2P35609 894 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 STAT1P42224 750 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 JAM2P57087 298 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 FGL2Q14314 439 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 KRT31Q15323 416 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 RAB6CQ53S08 254 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 PARS2Q7L3T8 475 aaKnown RBP21.09■□□□□ 0.97
CPNE1-219ENST00000440240 PHLDB2Q86SQ0 1253 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 OR2AP1Q8NGE2 309 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 JOSD2Q8TAC2 188 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 SNIP1Q8TAD8 396 aaKnown RBP21.09■□□□□ 0.97
CPNE1-219ENST00000440240 GPT2Q8TD30 523 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 TBC1D31Q96DN5 1066 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 APOLD1Q96LR9 279 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 OSBPL1AQ9BXW6 950 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 RAB6CQ9H0N0 254 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 NLRC4Q9NPP4 1024 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 ACTL7AQ9Y615 435 aa21.09■□□□□ 0.97
CPNE1-219ENST00000440240 SMG1Q96Q15 3661 aaKnown RBP21.09■□□□□ 0.97
CPNE1-219ENST00000440240 IGLON5A6NGN9 336 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 FAM72CH0Y354 149 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 H3BM21 787 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 K7ESM1 405 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 KRIT1O00522 736 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 RAD51BO15315 384 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 CSF2P04141 144 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 UNGP13051 313 aaPredicted RBP21.08■□□□□ 0.97
CPNE1-219ENST00000440240 ITPKBP27987 946 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 NSFP46459 744 aaKnown RBP21.08■□□□□ 0.97
CPNE1-219ENST00000440240 FZD2Q14332 565 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 MYLK3Q32MK0 819 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 ZNF542PQ5EBM4 170 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 FAM72AQ5TYM5 149 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 CDKAL1Q5VV42 579 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 FAM72DQ6L9T8 149 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 KDM7AQ6ZMT4 941 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 PARGQ86W56 976 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 FAM72BQ86X60 149 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 NTAN1Q96AB6 310 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 ABCG4Q9H172 646 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 ADAM22Q9P0K1 906 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 CSNK1G3Q9Y6M4 447 aa21.08■□□□□ 0.97
CPNE1-219ENST00000440240 ZSCAN5CA6NGD5 496 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-219ENST00000440240 RIOK3O14730 519 aaKnown RBP21.07■□□□□ 0.96
CPNE1-219ENST00000440240 KDELR3O43731 214 aa21.07■□□□□ 0.96
CPNE1-219ENST00000440240 OPA1O60313 960 aa21.07■□□□□ 0.96
CPNE1-219ENST00000440240 BRINP1O60477 761 aa21.07■□□□□ 0.96
CPNE1-219ENST00000440240 NME1P15531 152 aaKnown RBP21.07■□□□□ 0.96
CPNE1-219ENST00000440240 RFC1P35251 1148 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-219ENST00000440240 KLK7P49862 253 aa21.07■□□□□ 0.96
CPNE1-219ENST00000440240 HDAC4P56524 1084 aa21.07■□□□□ 0.96
CPNE1-219ENST00000440240 DENND6BQ8NEG7 585 aa21.07■□□□□ 0.96
CPNE1-219ENST00000440240 OR6K2Q8NGY2 324 aa21.07■□□□□ 0.96
CPNE1-219ENST00000440240 FAM172AQ8WUF8 416 aa21.07■□□□□ 0.96
CPNE1-219ENST00000440240 KLF6Q99612 283 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-219ENST00000440240 SELENOOQ9BVL4 669 aa21.07■□□□□ 0.96
CPNE1-219ENST00000440240 NCKIPSDQ9NZQ3 722 aa21.07■□□□□ 0.96
CPNE1-219ENST00000440240 TDRD6O60522 2096 aaKnown RBP21.06■□□□□ 0.96
CPNE1-219ENST00000440240 MYLKQ15746 1914 aa21.06■□□□□ 0.96
CPNE1-219ENST00000440240 GKP32189 559 aa21.06■□□□□ 0.96
CPNE1-219ENST00000440240 GSCP56915 257 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-219ENST00000440240 RAD51Q06609 339 aa21.06■□□□□ 0.96
CPNE1-219ENST00000440240 PTP4A2Q12974 167 aa21.06■□□□□ 0.96
CPNE1-219ENST00000440240 PDE1CQ14123 709 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-219ENST00000440240 SYCP1Q15431 976 aa21.06■□□□□ 0.96
CPNE1-219ENST00000440240 CDCP2Q5VXM1 449 aa21.06■□□□□ 0.96
CPNE1-219ENST00000440240 ZCCHC8Q6NZY4 707 aaKnown RBP21.06■□□□□ 0.96
CPNE1-219ENST00000440240 SLFN11Q7Z7L1 901 aa21.06■□□□□ 0.96
CPNE1-219ENST00000440240 TTC7BQ86TV6 843 aa21.06■□□□□ 0.96
CPNE1-219ENST00000440240 PHF13Q86YI8 300 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-219ENST00000440240 CCDC185Q8N715 623 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms