RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SH3BGRL2Q9UJC5 107 aa4.7□□□□□ -1.66
SF3B1-202ENST00000409915 CROTQ9UKG9 612 aa4.7□□□□□ -1.66
SF3B1-202ENST00000409915 TBX20Q9UMR3 447 aa4.7□□□□□ -1.66
SF3B1-202ENST00000409915 PLAGL2Q9UPG8 496 aa4.7□□□□□ -1.66
SF3B1-202ENST00000409915 HPSEQ9Y251 543 aa4.7□□□□□ -1.66
SF3B1-202ENST00000409915 GDAQ9Y2T3 454 aa4.7□□□□□ -1.66
SF3B1-202ENST00000409915 STARD13Q9Y3M8 1113 aa4.7□□□□□ -1.66
SF3B1-202ENST00000409915 CAPN7Q9Y6W3 813 aa4.7□□□□□ -1.66
SF3B1-202ENST00000409915 XIRP2A4UGR9 3374 aa4.7□□□□□ -1.66
SF3B1-202ENST00000409915 FNDC1Q4ZHG4 1894 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 A0A1W2PQ27 194 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 A0A1W2PQ64 194 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 A0A1W2PQD8 194 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 PRSS38A1L453 326 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 FRMD3A2A2Y4 597 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 CCDC162PA2VCL2 907 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ARL5CA6NH57 179 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 TMEM110-MUSTN1A8MSY1 372 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 F8W810 466 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 PTGESO14684 152 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 GRM6O15303 877 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 EIF3HO15372 352 aaKnown RBP eCLIP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 BIRC5O15392 142 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ZSCAN12O43309 604 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 THAP12O43422 761 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 TSPAN3O60637 253 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ZNF623O75123 536 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 DDHD2O94830 711 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 LUC7L3O95232 432 aaKnown RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 GCNT3O95395 438 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ALBP02768 609 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ITGB1P05556 798 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ANXA2P07355 339 aaKnown RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ITGA2BP08514 1039 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 KRT13P13646 458 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 IFNGR1P15260 489 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ABCD3P28288 659 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 AXLP30530 894 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 BMPR1AP36894 532 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ADH7P40394 386 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 TNFSF9P41273 254 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 MATR3P43243 847 aaKnown RBP eCLIP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 SYKP43405 635 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 CHRNA4P43681 627 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 LIG4P49917 911 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 IRAK1P51617 712 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ALDH3A2P51648 485 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 HK3P52790 923 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 CSE1LP55060 971 aaKnown RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 RPS16P62249 146 aaKnown RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 CTAG1AP78358 180 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 RNASELQ05823 741 aaKnown RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 NSUN2Q08J23 767 aaKnown RBP eCLIP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 BFSP1Q12934 665 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 TUSC3Q13454 348 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 GPM6BQ13491 265 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 DCAF4L1Q3SXM0 396 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 LACTB2Q53H82 288 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ARHGAP15Q53QZ3 475 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 HERC4Q5GLZ8 1057 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 NOMO2Q5JPE7 1267 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ZBTB41Q5SVQ8 909 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 SLC39A4Q6P5W5 647 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 GLB1LQ6UWU2 654 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ARHGAP36Q6ZRI8 547 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 USP51Q70EK9 711 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 CPLX4Q7Z7G2 160 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 MRPL10Q7Z7H8 261 aaKnown RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 SLFN11Q7Z7L1 901 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 CCDC117Q8IWD4 279 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 CCDC65Q8IXS2 484 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 THNSL1Q8IYQ7 743 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 RNF168Q8IYW5 571 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 SH2D3CQ8N5H7 860 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 TMCO5AQ8N6Q1 288 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ZBTB8BQ8NAP8 495 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 COLGALT1Q8NBJ5 622 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 DNAJB8Q8NHS0 232 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 GDAP1Q8TB36 358 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 URGCPQ8TCY9 931 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 BCL7CQ8WUZ0 217 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 NCSTNQ92542 709 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 EID2BQ96D98 161 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 FAM120BQ96EK7 910 aaKnown RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 RNF125Q96EQ8 232 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 CCDC51Q96ER9 411 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 PAGE5Q96GU1 130 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 FAM84AQ96KN4 292 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 PPP1R13BQ96KQ4 1090 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 SNX22Q96L94 193 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 MOGAT1Q96PD6 335 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 TWNKQ96RR1 684 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 NAP1L3Q99457 506 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-202ENST00000409915 BPIFA3Q9BQP9 254 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 TCHPQ9BT92 498 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ACAT2Q9BWD1 397 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ASPNQ9BXN1 380 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 ITPAQ9BY32 194 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 TRIM5Q9C035 493 aa4.69□□□□□ -1.66
SF3B1-202ENST00000409915 TNMDQ9H2S6 317 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms