RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 GIT1Q9Y2X7 761 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 STAU1O95793 577 aaKnown RBP14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 HIST1H2AGP0C0S8 130 aaPredicted RBP14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 ETS2P15036 469 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 NELFEP18615 380 aaKnown RBP14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 HIST1H2ADP20671 130 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 DNAJB2P25686 324 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 MAP4P27816 1152 aaKnown RBP14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 L1CAMP32004 1257 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 ALDH7A1P49419 539 aaKnown RBP14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 RGS4P49798 205 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 ZNF460Q14592 562 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 FSTL4Q6MZW2 842 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 DHDDSQ86SQ9 333 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 LGI2Q8N0V4 545 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 HIST1H2AHQ96KK5 128 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 QKIQ96PU8 341 aaKnown RBP eCLIP14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 HIST1H2AJQ99878 128 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 H2AFJQ9BTM1 129 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 PRDM16Q9HAZ2 1276 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 WWOXQ9NZC7 414 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 VPS28Q9UK41 221 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 SLC27A5Q9Y2P5 690 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 PSMD12O00232 456 aaPredicted RBP14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 FMO4P31512 558 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 WNT3AP56704 352 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 GRM3Q14832 879 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 NR6A1Q15406 480 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 SCARA3Q6AZY7 606 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 HDAC10Q969S8 669 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 HNRNPABQ99729 332 aaKnown RBP14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 PRKD2Q9BZL6 878 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 CLIC5Q9NZA1 410 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 PCDHB7Q9Y5E2 793 aa14.84□□□□□ -0.03
SFMBT1-201ENST00000394752 DPYSL4O14531 572 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 RPL9P32969 192 aaKnown RBP14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 CLCNKBP51801 687 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 FBXO39Q8N4B4 442 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 CARNMT1Q8N4J0 409 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 SNX31Q8N9S9 440 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 SH3TC2Q8TF17 1288 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 SLC35F5Q8WV83 523 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 SEMA3CQ99985 751 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 ABCC13Q9NSE7 274 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 FKBP9O95302 570 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 RHOCP08134 193 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 YWHAQP27348 245 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 FLT3LGP49771 235 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 ATN1P54259 1190 aaPredicted RBP14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 LAMB3Q13751 1172 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 ARL13AQ5H913 290 aaPredicted RBP14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 FKBP9P1Q75LS8 142 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 UBR7Q8N806 425 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 ZNF781Q8N8C0 355 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 PCED1BQ96HM7 432 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 C7orf26Q96N11 449 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 SGIP1Q9BQI5 828 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 ATP13A1Q9HD20 1204 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 CYLDQ9NQC7 956 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 PCDHB5Q9Y5E4 795 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 PTCH2Q9Y6C5 1203 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 DOCK1Q14185 1865 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 HSPA1AP0DMV8 641 aaKnown RBP14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 HSPA1BP0DMV9 641 aaKnown RBP14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 MPP1Q00013 466 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 KLF10Q13118 480 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 NAB1Q13506 487 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 RNF220Q5VTB9 566 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 ZNF280DQ6N043 979 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 LENG8Q96PV6 779 aaPredicted RBP14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 NPAS2Q99743 824 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 GATA5Q9BWX5 397 aaPredicted RBP14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 VTI1BQ9UEU0 232 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 MOSPD1Q9UJG1 213 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 SORCS3Q9UPU3 1222 aa14.83□□□□□ -0.04
SFMBT1-201ENST00000394752 RGSL1A5PLK6 1076 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 PAGE1O75459 146 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 ESRRBO95718 433 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 ALDH1A1P00352 501 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 CKMP06732 381 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 PIK3R1P27986 724 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 ALDH1A3P47895 512 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 RAB10P61026 200 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 GTF2H3Q13889 308 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 AMIGO2Q86SJ2 522 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 MFN1Q8IWA4 741 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 NXNL1Q96CM4 212 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 ACOX2Q99424 681 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 SIKE1Q9BRV8 207 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 GRIP2Q9C0E4 1043 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 ADAMTS10Q9H324 1103 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 RAP2CQ9Y3L5 183 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 BTN3A1O00481 513 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 CLASP2O75122 1294 aaKnown RBP14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 PEX11AO75192 247 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 GCATO75600 419 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 ALBP02768 609 aa14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 HNRNPCP07910 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 WARSP23381 471 aaKnown RBP14.82□□□□□ -0.04
SFMBT1-201ENST00000394752 DENND6AQ8IWF6 608 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms