RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 GUSBP11Q6P575 273 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 ZNF605Q86T29 641 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 FAM131BQ86XD5 332 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 DRC7Q8IY82 874 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 VOPP1Q96AW1 172 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 CFAP57Q96MR6 1250 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 LENG8Q96PV6 779 aaPredicted RBP14.04□□□□□ -0.16
CXCL12-202ENST00000374426 TM6SF2Q9BZW4 377 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 ZYG11BQ9C0D3 744 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 PDCL3Q9H2J4 239 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 EVA1BQ9NVM1 165 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 TMEM51Q9NW97 253 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 TMEM59LQ9UK28 342 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 CSNK1G3Q9Y6M4 447 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 RP1P56715 2156 aa14.04□□□□□ -0.16
CXCL12-202ENST00000374426 H3BM21 787 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 GOLGA8SH3BPF8 625 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 AQP9O43315 295 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 GKP32189 559 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 ACVRL1P37023 503 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 ABL2P42684 1182 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 UCNP55089 124 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 TMPRSS3P57727 454 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 PFN3P60673 137 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 CFHR1Q03591 330 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 EIF2B5Q13144 721 aaKnown RBP14.03□□□□□ -0.16
CXCL12-202ENST00000374426 DRAP1Q14919 205 aaPredicted RBP14.03□□□□□ -0.16
CXCL12-202ENST00000374426 CAMK4Q16566 473 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 MAN2A1Q16706 1144 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 DEFB133Q30KQ1 61 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 ARHGAP40Q5TG30 622 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 BROXQ5VW32 411 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 TAF3Q5VWG9 929 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 ZSCAN30Q86W11 494 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 OR6K2Q8NGY2 324 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 KCNE4Q8WWG9 221 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 ISG20Q96AZ6 181 aaKnown RBP14.03□□□□□ -0.16
CXCL12-202ENST00000374426 VCPIP1Q96JH7 1222 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 ZDHHC6Q9H6R6 413 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 NDFIP2Q9NV92 336 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 PPARGC1AQ9UBK2 798 aaKnown RBP14.03□□□□□ -0.16
CXCL12-202ENST00000374426 GGT7Q9UJ14 662 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 ITM2BQ9Y287 266 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 COL27A1Q8IZC6 1860 aaPredicted RBP14.03□□□□□ -0.16
CXCL12-202ENST00000374426 AHCTF1Q8WYP5 2266 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 MYO18BQ8IUG5 2567 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 BOD1L1Q8NFC6 3051 aa14.03□□□□□ -0.16
CXCL12-202ENST00000374426 CPED1A4D0V7 1026 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 EME2A4GXA9 379 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-202ENST00000374426 C16orf96A6NNT2 1141 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 FPGTO14772 594 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 KLK10O43240 276 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 TSPAN6O43657 245 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 JUNDP17535 347 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 RHDQ02161 417 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 SGCGQ13326 291 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 RAPGEF1Q13905 1077 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 RAB6CQ53S08 254 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 TAF1BQ53T94 588 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-202ENST00000374426 C3orf38Q5JPI3 329 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 MIIPQ5JXC2 388 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 MANEALQ5VSG8 457 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 IGF2-ASQ6U949 168 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 ARCQ7LC44 396 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 EFL1Q7Z2Z2 1120 aaKnown RBP14.02□□□□□ -0.17
CXCL12-202ENST00000374426 PLPP6Q8IY26 295 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 DENND6BQ8NEG7 585 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 LMX1AQ8TE12 382 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 ASB12Q8WXK4 309 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 ATXN7L3BQ96GX2 97 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 RAB6CQ9H0N0 254 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 TCEAL2Q9H3H9 227 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-202ENST00000374426 NDST4Q9H3R1 872 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 THSD1Q9NS62 852 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 NCKIPSDQ9NZQ3 722 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 IPO11Q9UI26 975 aaKnown RBP14.02□□□□□ -0.17
CXCL12-202ENST00000374426 SALL4Q9UJQ4 1053 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 PNMA8BQ9ULN7 279 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-202ENST00000374426 SATB2Q9UPW6 733 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 SSUH2Q9Y2M2 353 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 FHOD1Q9Y613 1164 aa14.02□□□□□ -0.17
CXCL12-202ENST00000374426 SPTA1P02549 2419 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 CXorf51AA0A1B0GTR3 108 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 TPP1O14773 563 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 CASC3O15234 703 aaKnown RBP14.01□□□□□ -0.17
CXCL12-202ENST00000374426 GCATO75600 419 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 LSM8O95777 96 aaKnown RBP14.01□□□□□ -0.17
CXCL12-202ENST00000374426 ATP11AP98196 1134 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 KIF26BQ2KJY2 2108 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 VWA3BQ502W6 1294 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 ZNF805Q5CZA5 627 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 PERM1Q5SV97 790 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 CRTC1Q6UUV9 634 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 NOP9Q86U38 636 aaKnown RBP14.01□□□□□ -0.17
CXCL12-202ENST00000374426 NLRP14Q86W24 1093 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 RBFAQ8N0V3 343 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 EMC1Q8N766 993 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 MLKLQ8NB16 471 aa14.01□□□□□ -0.17
CXCL12-202ENST00000374426 SNRNP27Q8WVK2 155 aaKnown RBP14.01□□□□□ -0.17
CXCL12-202ENST00000374426 CPA5Q8WXQ8 436 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms