RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 FBXL8Q96CD0 374 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 HIPK3Q9H422 1215 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 VTA1Q9NP79 307 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 STX16-NPEPL1H3BU86 382 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 M0QYT0 321 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 C1QAP02745 245 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 FGFR3P22607 806 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 DUSP28Q4G0W2 176 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 KIAA0319Q5VV43 1072 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 GPR141Q7Z602 305 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 UNKQ9C0B0 810 aaKnown RBP17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 VRTNQ9H8Y1 702 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 TMEM30AQ9NV96 361 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 VPS51Q9UID3 782 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 GNPTGQ9UJJ9 305 aa17.54■□□□□ 0.4
LDLRAP1-201ENST00000374338 ZBTB14O43829 449 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 SNNO75324 88 aaPredicted RBP17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 ERVK-10P10266 1014 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 SERPINB5P36952 375 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 BMXP51813 675 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 CCNA1P78396 465 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 ZBTB17Q13105 803 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 VASH1Q7L8A9 365 aaPredicted RBP17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 PCYOX1LQ8NBM8 494 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 SEMA6AQ9H2E6 1030 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 EHD1Q9H4M9 534 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 TTC3P53804 2025 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 LOC285556D6RIA3 1793 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 GOLGA8QA0A0J9YX86 632 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 GOLGA8OA6NCC3 632 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 GOLGA8NF8WBI6 632 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 NRP1O14786 923 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 PFDN6O15212 129 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 KRT37O76014 449 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 SAT1P21673 171 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 PSMB4P28070 264 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 RGS21Q2M5E4 152 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 PDPK2PQ6A1A2 396 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 SLC9A4Q6AI14 798 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 NOTUMQ6P988 496 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 GPRIN1Q7Z2K8 1008 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 KDELC2Q7Z4H8 507 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 PNPLA1Q8N8W4 532 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 COLGALT1Q8NBJ5 622 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 PIWIL2Q8TC59 973 aaKnown RBP17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 SIGLEC10Q96LC7 697 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 PKP2Q99959 881 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 MYRFQ9Y2G1 1151 aa17.53■□□□□ 0.4
LDLRAP1-201ENST00000374338 KRBA1A5PL33 1030 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 I6L893 689 aaPredicted RBP17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 ESRRBO95718 433 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 TPH1P17752 444 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 PTPN1P18031 435 aaKnown RBP17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 TUBA4AP68366 448 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 WDR75Q8IWA0 830 aaKnown RBP17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 APPL2Q8NEU8 664 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 ZSCAN18Q8TBC5 510 aaPredicted RBP17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 EFHD2Q96C19 240 aaPredicted RBP17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 SACM1LQ9NTJ5 587 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 OLAHQ9NV23 265 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 GID8Q9NWU2 228 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 NUDT5Q9UKK9 219 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 C7orf72A4D263 438 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 CHADO15335 359 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 XRCC1P18887 633 aaPredicted RBP17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 CD247P20963 164 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 GABRB3P28472 473 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 IDH3AP50213 366 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 TXNL4AP83876 142 aaKnown RBP17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 TEDDM1Q5T9Z0 273 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 IL23RQ5VWK5 629 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 PTCD2Q8WV60 388 aaKnown RBP17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 SIAEQ9HAT2 523 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 CORINQ9Y5Q5 1042 aa17.52■□□□□ 0.4
LDLRAP1-201ENST00000374338 SBF1O95248 1867 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 CSPG5O95196 566 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 APOEP02649 317 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 DARSP14868 501 aaKnown RBP17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 TCEA1P23193 301 aaKnown RBP17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 SLC1A6P48664 564 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 CCT8P50990 548 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 BST2Q10589 180 aaKnown RBP17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 NR1D2Q14995 579 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 SNX17Q15036 470 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 PDK2Q15119 407 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 SF3B4Q15427 424 aaKnown RBP eCLIP17.51■□□□□ 0.395e-7■■■■■ 27.8
LDLRAP1-201ENST00000374338 ZBTB6Q15916 424 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 SLC7A14Q8TBB6 771 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 CTRCQ99895 268 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 PIGVQ9NUD9 493 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 ERGIC3Q9Y282 383 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 CASTOR2A6NHX0 329 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 ZNF701M0R085 212 aaPredicted RBP17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 KDM1AO60341 852 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 BMP10O95393 424 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 CAPNS1P04632 268 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 C8BP07358 591 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 PCYT1AP49585 367 aa17.51■□□□□ 0.39
LDLRAP1-201ENST00000374338 NUDT2P50583 147 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms