RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 NAPEPLDQ6IQ20 393 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 LINC00523Q86TU6 105 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 CCNJLQ8IV13 435 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 ANKMY2Q8IV38 441 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 PALM2Q8IXS6 379 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 KIAA1958Q8N8K9 716 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 TDRD5Q8NAT2 981 aaKnown RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 OR52K2Q8NGK3 314 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 USP33Q8TEY7 942 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 ING5Q8WYH8 240 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 USP13Q92995 863 aaPredicted RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 SIGLEC10Q96LC7 697 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 MLPHQ9BV36 600 aaPredicted RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 SLC25A51Q9H1U9 297 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 HAUS2Q9NVX0 235 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 PRKAG3Q9UGI9 489 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 CCL26Q9Y258 94 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 MRPS23Q9Y3D9 190 aaKnown RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 HMGB1P1B2RPK0 211 aaPredicted RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 F5H423 210 aaPredicted RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 RASGRF2O14827 1237 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 KDELR3O43731 214 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 GSTA2P09210 222 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 GRIA1P42261 906 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 MMP13P45452 471 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 GEMP55040 296 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 GPX6P59796 221 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 SLC10A7Q0GE19 358 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 RFTN1Q14699 578 aaPredicted RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 LBRQ14739 615 aaKnown RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 TTMPQ5BVD1 217 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 HP1BP3Q5SSJ5 553 aaPredicted RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 AGBL2Q5U5Z8 902 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 NAIF1Q69YI7 327 aaPredicted RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 IL31Q6EBC2 164 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 C3orf62Q6ZUJ4 267 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 OTOP3Q7RTS5 596 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 AGGF1Q8N302 714 aaeCLIP12.25□□□□□ -0.45
USF1-203ENST00000368021 ITFG1Q8TB96 612 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 MIPOL1Q8TD10 442 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 ARL8AQ96BM9 186 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 PGM2Q96G03 612 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 OXNAD1Q96HP4 312 aaPredicted RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 ATP6V1G3Q96LB4 118 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 EBNA1BP2Q99848 306 aaKnown RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 NAT9Q9BTE0 207 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 VPS37BQ9H9H4 285 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 CASS4Q9NQ75 786 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 VPS45Q9NRW7 570 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 FETUBQ9UGM5 382 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 LIMD1Q9UGP4 676 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 CHMP2BQ9UQN3 213 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 SDR42E2A6NKP2 422 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 H0Y626 953 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 DLL1O00548 723 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 CEBPBP17676 345 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 FSHRP23945 695 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 LIG3P49916 1009 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 RPS6KA3P51812 740 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 OXCT1P55809 520 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 USP4Q13107 963 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 MPP3Q13368 585 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 MTM1Q13496 603 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 CDH18Q13634 790 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 ZNF77Q15935 545 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 SNCBQ16143 134 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 ALG1LQ6GMV1 187 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 IGDCC3Q8IVU1 814 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 BBS5Q8N3I7 341 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 OR7D4Q8NG98 312 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 UHMK1Q8TAS1 419 aaKnown RBP12.24□□□□□ -0.45
USF1-203ENST00000368021 OTUB2Q96DC9 234 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 IMP4Q96G21 291 aaKnown RBP12.24□□□□□ -0.45
USF1-203ENST00000368021 SMG9Q9H0W8 520 aaKnown RBP12.24□□□□□ -0.45
USF1-203ENST00000368021 KIF9Q9HAQ2 790 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 ATP13A1Q9HD20 1204 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 TBC1D14Q9P2M4 693 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 TTLL3Q9Y4R7 772 aa12.24□□□□□ -0.45
USF1-203ENST00000368021 SCAMP3O14828 347 aaKnown RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 AHCYL1O43865 530 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 PRAMEF12O95522 483 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 CYBBP04839 570 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 ASGR2P07307 311 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 SSTR1P30872 391 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 GCKP35557 465 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 CDH17Q12864 832 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 RASA2Q15283 850 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 RNF219Q5W0B1 726 aaPredicted RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 CYS1Q717R9 158 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 TDRPQ86YL5 185 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 MFN1Q8IWA4 741 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 RIBC1Q8N443 379 aaPredicted RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 CARNMT1Q8N4J0 409 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 NUP210Q8TEM1 1887 aaPredicted RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 DDI1Q8WTU0 396 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 MYADMQ96S97 322 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 FEM1AQ9BSK4 669 aa12.23□□□□□ -0.45
USF1-203ENST00000368021 POLR1EQ9GZS1 481 aaKnown RBP12.23□□□□□ -0.45
USF1-203ENST00000368021 MUC3BQ9H195 1237 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms