RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 AFDNP55196 1824 aaKnown RBP6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 A0A087X0M5 115 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 A0A1B0GX30 115 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 A0A1W2PPH5 198 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 TNPO2O14787 897 aaKnown RBP6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 DSCR3O14972 297 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 SYN3O14994 580 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 MATN3O15232 486 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 EIF5BO60841 1220 aaKnown RBP6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 CYP4B1P13584 511 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 INSRRP14616 1297 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 PKMP14618 531 aaKnown RBP6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 PRKAR2BP31323 418 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 PAFAH1B1P43034 410 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 KRTAP10-2P60368 255 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 ARHGAP8P85298 464 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 CAMK1Q14012 370 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 TSTQ16762 297 aaKnown RBP6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 GLE1Q53GS7 698 aaKnown RBP6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 FAM69AQ5T7M9 428 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 MZT2BQ6NZ67 158 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 C4orf50Q6ZRC1 276 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 AMIGO2Q86SJ2 522 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 ADGRG6Q86SQ4 1221 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 TMEM200AQ86VY9 491 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 EXD3Q8N9H8 876 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 RUFY2Q8WXA3 655 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 CENPIQ92674 756 aaPredicted RBP6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 CELF1Q92879 486 aaKnown RBP6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 ELP4Q96EB1 424 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 CAPNS2Q96L46 248 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 CD180Q99467 661 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 TIMP4Q99727 224 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 NUAK2Q9H093 628 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 INTS2Q9H0H0 1204 aaKnown RBP6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 ALKBH4Q9NXW9 302 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 SLC17A6Q9P2U8 582 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 PACSIN3Q9UKS6 424 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 PKP3Q9Y446 797 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 COL11A2P13942 1736 aaPredicted RBP6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 ANKRD31Q8N7Z5 1873 aa6.07□□□□□ -1.44
RNU4-39P-201ENST00000362455 SLX4Q8IY92 1834 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 UBN2Q6ZU65 1347 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 CLSPNQ9HAW4 1339 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 PRSS47A8MTI9 375 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 DDX58O95786 925 aaKnown RBP6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 F9P00740 461 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 ENO1P06733 434 aaKnown RBP6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 TGM2P21980 687 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 IDUAP35475 653 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 HNF1BP35680 557 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 GPD2P43304 727 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 CCR9P51686 369 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 CACNA2D1P54289 1103 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 ADPRHP54922 357 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 MAP2K1Q02750 393 aaPredicted RBP6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 BYSLQ13895 437 aaKnown RBP6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 KRT32Q14532 448 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 NAA25Q14CX7 972 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 ZXDCQ2QGD7 858 aaPredicted RBP6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 PRICKLE4Q2TBC4 344 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 SH2D4BQ5SQS7 431 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 AKNAD1Q5T1N1 836 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 SUSD4Q5VX71 490 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 RTL10Q7L3V2 364 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 RNF144BQ7Z419 303 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 MDGA2Q7Z553 956 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 R3HCC1LQ7Z5L2 792 aaKnown RBP6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 GALNT7Q86SF2 657 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 RFX6Q8HWS3 928 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 BRSK2Q8IWQ3 736 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 RFWD2Q8NHY2 731 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 C2CD4CQ8TF44 421 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 SH3KBP1Q96B97 665 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 UROC1Q96N76 676 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 PRRX2Q99811 253 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 CLSTN3Q9BQT9 956 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 TTYH1Q9H313 450 aaPredicted RBP6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 ARL8BQ9NVJ2 186 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 ASB6Q9NWX5 421 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 ORC3Q9UBD5 711 aaPredicted RBP6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 SERGEFQ9UGK8 458 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 ABT1Q9ULW3 272 aaKnown RBP6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 SCINQ9Y6U3 715 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 SCN11AQ9UI33 1791 aa6.06□□□□□ -1.44
RNU4-39P-201ENST00000362455 TARM1B6A8C7 271 aa6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 MCIDASD6RGH6 385 aa6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 F5H0A9 414 aaPredicted RBP6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 TCERG1O14776 1098 aaKnown RBP6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 CCNT1O60563 726 aaKnown RBP6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 TMEM63AO94886 807 aa6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 HOXB9P17482 250 aaPredicted RBP6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 WT1P19544 449 aaPredicted RBP6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 GPTP24298 496 aa6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 ALDH1B1P30837 517 aa6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 SOX10P56693 466 aa6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 DCAF7P61962 342 aa6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 CXCL9Q07325 125 aa6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 FOXD4Q12950 439 aaPredicted RBP6.05□□□□□ -1.44
RNU4-39P-201ENST00000362455 SEC23BQ15437 767 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms