RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 ARID3BQ8IVW6 561 aaPredicted RBP9.82□□□□□ -0.84
GABPA-201ENST00000354828 ACDQ96AP0 544 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 SIPA1Q96FS4 1042 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 MS4A4AQ96JQ5 239 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 MBOAT7Q96N66 472 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 PTPN18Q99952 460 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 PABPC3Q9H361 631 aaKnown RBP9.82□□□□□ -0.84
GABPA-201ENST00000354828 CHST7Q9NS84 486 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 OPTCQ9UBM4 332 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 SUFUQ9UMX1 484 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 RHPN2P1A8MT19 583 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 H3BM21 787 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 CDK14O94921 469 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 TBX18O95935 607 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 FGF1P05230 155 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 ANXA5P08758 320 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 CPA3P15088 417 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 WNT3AP56704 352 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 DAOAP59103 153 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 GUCY1A3Q02108 690 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 ACTN3Q08043 901 aaPredicted RBP9.82□□□□□ -0.84
GABPA-201ENST00000354828 PTPRNQ16849 979 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 LYPLAL1Q5VWZ2 237 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 CNSTQ6PJW8 725 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 RGS9BPQ6ZS82 235 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 SPATA21Q7Z572 469 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 PARGQ86W56 976 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 GPSM1Q86YR5 675 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 GALNT13Q8IUC8 556 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 ZSCAN18Q8TBC5 510 aaPredicted RBP9.82□□□□□ -0.84
GABPA-201ENST00000354828 KLK6Q92876 244 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 SERPINB12Q96P63 405 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 FCF1Q9Y324 198 aaKnown RBP9.82□□□□□ -0.84
GABPA-201ENST00000354828 LRRC10BA6NIK2 292 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 PITPNM1O00562 1244 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 NUDT14O95848 222 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 MPOP05164 745 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 IDSP22304 550 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 CXCR2P25025 360 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 CRADDP78560 199 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 IRF8Q02556 426 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 SCARA3Q6AZY7 606 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 PDE12Q6L8Q7 609 aaKnown RBP9.82□□□□□ -0.84
GABPA-201ENST00000354828 SLC26A9Q7LBE3 791 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 CXorf38Q8TB03 319 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 ATL1Q8WXF7 558 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 AP2M1Q96CW1 435 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 CPNE1Q99829 537 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 ABCG8Q9H221 673 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 AGO3Q9H9G7 860 aaKnown RBP9.82□□□□□ -0.84
GABPA-201ENST00000354828 WNT6Q9Y6F9 365 aa9.82□□□□□ -0.84
GABPA-201ENST00000354828 NUP98P52948 1817 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 TMEM114B3SHH9 223 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 FPGTO14772 594 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 ZSCAN5DPP0CG00 497 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 HNF4AP41235 474 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 INPP5AQ14642 412 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 FAM187BQ17R55 369 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 C11orf74Q86VG3 221 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 HID1Q8IV36 788 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 CMTR2Q8IYT2 770 aaKnown RBP9.81□□□□□ -0.84
GABPA-201ENST00000354828 VPS50Q96JG6 964 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 NDEL1Q9GZM8 345 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 ZNF556Q9HAH1 456 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 ELOVL2Q9NXB9 296 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 PCDHA11Q9Y5I1 949 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 RAI2Q9Y5P3 530 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 LOC100653049A0A140TA62 436 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 A0A1W2PQ67 120 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 SCAMP1O15126 338 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 KRT34O76011 436 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 ASLP04424 464 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 HLA-DPA1P20036 260 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 TLX1P31314 330 aaPredicted RBP9.81□□□□□ -0.84
GABPA-201ENST00000354828 STXBP5Q5T5C0 1151 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 CEP70Q8NHQ1 597 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 METTL6Q8TCB7 284 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 DNAJC1Q96KC8 554 aaKnown RBP9.81□□□□□ -0.84
GABPA-201ENST00000354828 ZIC5Q96T25 663 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 FAM124BQ9H5Z6 455 aaPredicted RBP9.81□□□□□ -0.84
GABPA-201ENST00000354828 PCDH18Q9HCL0 1135 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 NCDNQ9UBB6 729 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 SQORQ9Y6N5 450 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 ADGRA3Q8IWK6 1321 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 A0A096LPK6 155 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 RASSF10A6NK89 507 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 PJA2O43164 708 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 GCATO75600 419 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 MT-CO1P00395 513 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 PABPC1P11940 636 aaKnown RBP9.81□□□□□ -0.84
GABPA-201ENST00000354828 MMP8P22894 467 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 MC4RP32245 332 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 ABCG1P45844 678 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 CLNS1AP54105 237 aaKnown RBP9.81□□□□□ -0.84
GABPA-201ENST00000354828 SLC20A2Q08357 652 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 EOGTQ5NDL2 527 aa9.81□□□□□ -0.84
GABPA-201ENST00000354828 TMCO2Q7Z6W1 182 aaPredicted RBP9.81□□□□□ -0.84
GABPA-201ENST00000354828 RAVER1Q8IY67 606 aaKnown RBP9.81□□□□□ -0.84
GABPA-201ENST00000354828 EPS8L3Q8TE67 593 aaKnown RBP9.81□□□□□ -0.84
GABPA-201ENST00000354828 KXD1Q9BQD3 176 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms