RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 MID2Q9UJV3 735 aa18.05■□□□□ 0.48
IFFO1-201ENST00000336604 TARM1B6A8C7 271 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 DDHD2O94830 711 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 PGK1P00558 417 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 F9P00740 461 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 XRCC1P18887 633 aaPredicted RBP18.04■□□□□ 0.48
IFFO1-201ENST00000336604 PRKAA1Q13131 559 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 CYLC2Q14093 348 aaPredicted RBP18.04■□□□□ 0.48
IFFO1-201ENST00000336604 ESRP1Q6NXG1 681 aaKnown RBP18.04■□□□□ 0.48
IFFO1-201ENST00000336604 USP50Q70EL3 339 aaPredicted RBP18.04■□□□□ 0.48
IFFO1-201ENST00000336604 CCNYL1Q8N7R7 359 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 KLHL23Q8NBE8 558 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 RDH11Q8TC12 318 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 SLC2A6Q9UGQ3 507 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 ANKRD6Q9Y2G4 727 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 CASQ2O14958 399 aaPredicted RBP18.04■□□□□ 0.48
IFFO1-201ENST00000336604 ZNF189O75820 626 aaPredicted RBP18.04■□□□□ 0.48
IFFO1-201ENST00000336604 MYL3P08590 195 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 ARNTP27540 789 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 HADHAP40939 763 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 LHX1P48742 406 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 MRPS22P82650 360 aaKnown RBP18.04■□□□□ 0.48
IFFO1-201ENST00000336604 PM20D1Q6GTS8 502 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 LRRC8EQ6NSJ5 796 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 SDCCAG8Q86SQ7 713 aaPredicted RBP18.04■□□□□ 0.48
IFFO1-201ENST00000336604 NXNL1Q96CM4 212 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 SGF29Q96ES7 293 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 ATXN3LQ9H3M9 355 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 MIOSQ9NXC5 875 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 ACOT9Q9Y305 439 aa18.04■□□□□ 0.48
IFFO1-201ENST00000336604 CASTOR2A6NHX0 329 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 STX16-NPEPL1H3BU86 382 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 ENO3P13929 434 aaPredicted RBP18.03■□□□□ 0.48
IFFO1-201ENST00000336604 ALDH1A3P47895 512 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 PAN2Q504Q3 1202 aaKnown RBP18.03■□□□□ 0.48
IFFO1-201ENST00000336604 PKN3Q6P5Z2 889 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 PQLC1Q8N2U9 271 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 RP9Q8TA86 221 aaKnown RBP18.03■□□□□ 0.48
IFFO1-201ENST00000336604 ZC3H15Q8WU90 426 aaKnown RBP18.03■□□□□ 0.48
IFFO1-201ENST00000336604 TBL1YQ9BQ87 522 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 DNAAF2Q9NVR5 837 aaKnown RBP18.03■□□□□ 0.48
IFFO1-201ENST00000336604 CDYLQ9Y232 598 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 DPP6P42658 865 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 NSUN2Q08J23 767 aaKnown RBP eCLIP18.03■□□□□ 0.48
IFFO1-201ENST00000336604 FLOT2Q14254 428 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 TSTD2Q5T7W7 516 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 DCLRE1AQ6PJP8 1040 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 C16orf89Q6UX73 402 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 BNC2Q6ZN30 1099 aaPredicted RBP18.03■□□□□ 0.48
IFFO1-201ENST00000336604 LINC00523Q86TU6 105 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 LCA5Q86VQ0 697 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 ICA1LQ8NDH6 482 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 SMARCD1Q96GM5 515 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 ZNF385DQ9H6B1 395 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 SUDS3Q9H7L9 328 aaPredicted RBP18.03■□□□□ 0.48
IFFO1-201ENST00000336604 NSMCE4AQ9NXX6 385 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 PRPF19Q9UMS4 504 aaKnown RBP18.03■□□□□ 0.48
IFFO1-201ENST00000336604 NEU3Q9UQ49 428 aa18.03■□□□□ 0.48
IFFO1-201ENST00000336604 CCDC160A6NGH7 325 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 UNCXA6NJT0 531 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 BDNFP23560 247 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 RAB10P61026 200 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 XIAPP98170 497 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 FOLH1Q04609 750 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 CEACAM7Q14002 265 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 PDK3Q15120 406 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 PIGGQ5H8A4 983 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 PCID2Q5JVF3 399 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 OGFRL1Q5TC84 451 aaPredicted RBP18.02■□□□□ 0.48
IFFO1-201ENST00000336604 C9orf131Q5VYM1 1079 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 ZNF280DQ6N043 979 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 GPR78Q96P69 363 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 FICDQ9BVA6 458 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 PSMD13Q9UNM6 376 aa18.02■□□□□ 0.48
IFFO1-201ENST00000336604 FAM95CA0A1B0GW59 222 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 PFDN1O60925 122 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 PABPC4LP0CB38 370 aaKnown RBP18.02■□□□□ 0.47
IFFO1-201ENST00000336604 STMN1P16949 149 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 MS4A2Q01362 244 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 MAP7Q14244 749 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 CNGA3Q16281 694 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 ZNF423Q2M1K9 1284 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 EML3Q32P44 896 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 DENND5AQ6IQ26 1287 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 ATPAF2Q8N5M1 289 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 DQX1Q8TE96 717 aaKnown RBP18.02■□□□□ 0.47
IFFO1-201ENST00000336604 MYLPFQ96A32 169 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 SERPINI1Q99574 410 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 NDFIP2Q9NV92 336 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 RRN3Q9NYV6 651 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 FLRT1Q9NZU1 646 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 AAR2Q9Y312 384 aaKnown RBP18.02■□□□□ 0.47
IFFO1-201ENST00000336604 DTNAQ9Y4J8 743 aa18.02■□□□□ 0.47
IFFO1-201ENST00000336604 NEMP2A6NFY4 417 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 HAS3O00219 553 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 THP07101 528 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 SLC1A2P43004 574 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 ARCN1P48444 511 aaKnown RBP18.01■□□□□ 0.47
IFFO1-201ENST00000336604 ARHGAP12Q8IWW6 846 aa18.01■□□□□ 0.47
IFFO1-201ENST00000336604 TMEM86AQ8N2M4 240 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms