RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 HERC3Q15034 1050 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 C11orf91Q3C1V1 193 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 DENND5AQ6IQ26 1287 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 FBXL19Q6PCT2 694 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 KDM1BQ8NB78 822 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 IPMKQ8NFU5 416 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 GAD1Q99259 594 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 MIOSQ9NXC5 875 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 C17orf102A2RUQ5 167 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 TXNDC9O14530 226 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 CFLARO15519 480 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 ANXA9O76027 345 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 MYL3P08590 195 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 MSX2P35548 267 aaPredicted RBP15.43■□□□□ 0.06
DDX56-201ENST00000258772 FLOT2Q14254 428 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 CNPY1Q3B7I2 92 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 TSTD2Q5T7W7 516 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 ANKRD23Q86SG2 305 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 PGAM4Q8N0Y7 254 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 SPATA6LQ8N4H0 392 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 IRGQQ8WZA9 623 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 ZNF419Q96HQ0 510 aaPredicted RBP15.43■□□□□ 0.06
DDX56-201ENST00000258772 GCNAQ96QF7 691 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 OMDQ99983 421 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 SIK2Q9H0K1 926 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 EFCAB1Q9HAE3 211 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 NEU3Q9UQ49 428 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 TADA2AO75478 443 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 ENO3P13929 434 aaPredicted RBP15.43■□□□□ 0.06
DDX56-201ENST00000258772 CHN2P52757 468 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 PKNOX1P55347 436 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 MS4A2Q01362 244 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 CEACAM7Q14002 265 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 PDCD2Q16342 344 aaPredicted RBP15.43■□□□□ 0.06
DDX56-201ENST00000258772 UGT2A3Q6UWM9 527 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 ARHGAP12Q8IWW6 846 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 ATPAF2Q8N5M1 289 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 CCNYL1Q8N7R7 359 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 PIP4K2CQ8TBX8 421 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 DQX1Q8TE96 717 aaKnown RBP15.43■□□□□ 0.06
DDX56-201ENST00000258772 IL12RB2Q99665 862 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 FICDQ9BVA6 458 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 WDR41Q9HAD4 459 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 GLOD4Q9HC38 313 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 MYLKQ15746 1914 aa15.43■□□□□ 0.06
DDX56-201ENST00000258772 NPHS1O60500 1241 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 PCSK1P29120 753 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 GRIA2P42262 883 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 DPP6P42658 865 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 MRPS22P82650 360 aaKnown RBP15.42■□□□□ 0.06
DDX56-201ENST00000258772 BEX3Q00994 111 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 ART3Q13508 389 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 ZFP1Q6P2D0 407 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 POTEHQ6S545 545 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 PPHLN1Q8NEY8 458 aaKnown RBP15.42■□□□□ 0.06
DDX56-201ENST00000258772 MYLPFQ96A32 169 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 DCUN1D1Q96GG9 259 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 MARK4Q96L34 752 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 UNKQ9C0B0 810 aaKnown RBP15.42■□□□□ 0.06
DDX56-201ENST00000258772 MRPL46Q9H2W6 279 aaKnown RBP15.42■□□□□ 0.06
DDX56-201ENST00000258772 SLC2A6Q9UGQ3 507 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 BCAP29Q9UHQ4 241 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 COPG1Q9Y678 874 aaKnown RBP15.42■□□□□ 0.06
DDX56-201ENST00000258772 DENRO43583 198 aaKnown RBP15.42■□□□□ 0.06
DDX56-201ENST00000258772 MAFKO60675 156 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 ZNF865P0CJ78 1059 aaPredicted RBP15.42■□□□□ 0.06
DDX56-201ENST00000258772 ME2P23368 584 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 CYP2C18P33260 490 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 SLC1A2P43004 574 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 TAS2R39P59534 338 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 CNGA3Q16281 694 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 FAM110CQ1W6H9 321 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 CCDC117Q8IWD4 279 aaPredicted RBP15.42■□□□□ 0.06
DDX56-201ENST00000258772 NCSTNQ92542 709 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 USP13Q92995 863 aaPredicted RBP15.42■□□□□ 0.06
DDX56-201ENST00000258772 MAELQ96JY0 434 aaKnown RBP15.42■□□□□ 0.06
DDX56-201ENST00000258772 UBE2OQ9C0C9 1292 aaKnown RBP15.42■□□□□ 0.06
DDX56-201ENST00000258772 ZNF408Q9H9D4 720 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 FAM105AQ9NUU6 356 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 ARHGEF38Q9NXL2 777 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 TCAF1Q9Y4C2 921 aa15.42■□□□□ 0.06
DDX56-201ENST00000258772 TCAF2A6NFQ2 919 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 TMEM233B4DJY2 109 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 MATN3O15232 486 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 AP1G1O43747 822 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 PABPC4LP0CB38 370 aaKnown RBP15.41■□□□□ 0.06
DDX56-201ENST00000258772 BDNFP23560 247 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 ADRA1AP35348 466 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 EIF4EBP2Q13542 120 aaPredicted RBP15.41■□□□□ 0.06
DDX56-201ENST00000258772 RFTN1Q14699 578 aaPredicted RBP15.41■□□□□ 0.06
DDX56-201ENST00000258772 TLR1Q15399 786 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 TIGD5Q53EQ6 642 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 C9orf131Q5VYM1 1079 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 FAM43BQ6ZT52 329 aaPredicted RBP15.41■□□□□ 0.06
DDX56-201ENST00000258772 TMEM126BQ8IUX1 230 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 RNF148Q8N7C7 305 aa15.41■□□□□ 0.06
DDX56-201ENST00000258772 TXNDC5Q8NBS9 432 aaKnown RBP15.41■□□□□ 0.06
DDX56-201ENST00000258772 C2CD4AQ8NCU7 369 aaPredicted RBP15.41■□□□□ 0.06
DDX56-201ENST00000258772 PTCD2Q8WV60 388 aaKnown RBP15.41■□□□□ 0.06
DDX56-201ENST00000258772 LPPQ93052 612 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms