RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 NLRC5Q86WI3 1866 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 PLD4Q96BZ4 506 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 B3GALT6Q96L58 329 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 DCLK3Q9C098 648 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 ADAM7Q9H2U9 754 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 CDC42EP4Q9H3Q1 356 aaKnown RBP11.82□□□□□ -0.52
LINC00538-201ENST00000626109 ATP13A1Q9HD20 1204 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 SLC40A1Q9NP59 571 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 DDX43Q9NXZ2 648 aaKnown RBP11.82□□□□□ -0.52
LINC00538-201ENST00000626109 MOSPD1Q9UJG1 213 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 TLR6Q9Y2C9 796 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 TNRC18O15417 2968 aaPredicted RBP11.82□□□□□ -0.52
LINC00538-201ENST00000626109 HNRNPCL2B2RXH8 293 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 HNRNPCL1O60812 293 aaKnown RBP11.82□□□□□ -0.52
LINC00538-201ENST00000626109 CILPO75339 1184 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 KCNH1O95259 989 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 CYP1A1P04798 512 aaPredicted RBP11.82□□□□□ -0.52
LINC00538-201ENST00000626109 ACO1P21399 889 aaKnown RBP11.82□□□□□ -0.52
LINC00538-201ENST00000626109 DNAJB1P25685 340 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 PCSK1P29120 753 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 SLCO1A2P46721 670 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 PRIM2P49643 509 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 NDST1P52848 882 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 GPM6BQ13491 265 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 CNGA2Q16280 664 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 RTP2Q5QGT7 225 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 RHBDF2Q6PJF5 856 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 TAS1R1Q7RTX1 841 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC00538-201ENST00000626109 RBBP8NLQ8NC74 664 aaPredicted RBP11.82□□□□□ -0.52
LINC00538-201ENST00000626109 CPA5Q8WXQ8 436 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 ARNTL2Q8WYA1 636 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 OXCT2Q9BYC2 517 aaPredicted RBP11.82□□□□□ -0.52
LINC00538-201ENST00000626109 CERS4Q9HA82 394 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 CHST7Q9NS84 486 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 GRHPRQ9UBQ7 328 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 GRID1Q9ULK0 1009 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 PRELID1Q9Y255 219 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 TMED5Q9Y3A6 229 aa11.82□□□□□ -0.52
LINC00538-201ENST00000626109 KRT87PA6NCN2 255 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 H3BNC9 293 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 OAZ2O95190 189 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 RECQLP46063 649 aaPredicted RBP11.81□□□□□ -0.52
LINC00538-201ENST00000626109 NR2C2P49116 596 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 ITGA8P53708 1063 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 SLC26A5P58743 744 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 DSG1Q02413 1049 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 XRCC4Q13426 336 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 DHCR24Q15392 516 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 SNCBQ16143 134 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 PSMD5Q16401 504 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 ZNF674Q2M3X9 581 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 CTXN3Q4LDR2 81 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 C11orf88Q6PI97 169 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 EXOC3L1Q86VI1 746 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 KATNAL2Q8IYT4 538 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 LRRC34Q8IZ02 419 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 SPPL3Q8TCT6 385 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 ACMSDQ8TDX5 336 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 NRBF2Q96F24 287 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 ZBP1Q9H171 429 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 LRRC4CQ9HCJ2 640 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 ENTPD7Q9NQZ7 604 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 MRPL17Q9NRX2 175 aaKnown RBP11.81□□□□□ -0.52
LINC00538-201ENST00000626109 ADAM22Q9P0K1 906 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 TSC2P49815 1807 aa11.81□□□□□ -0.52
LINC00538-201ENST00000626109 CFAP73A6NFT4 308 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 OR6C75A6NL08 312 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 C2CD2LO14523 706 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 LPXNO60711 386 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 ACSL3O95573 720 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 CTSAP10619 480 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 CREMQ03060 361 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 ZNF460Q14592 562 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 KCTD19Q17RG1 926 aaPredicted RBP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 TBC1D25Q3MII6 688 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 ARL13BQ3SXY8 428 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 RBM20Q5T481 1227 aaKnown RBP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 PRSS55Q6UWB4 352 aaPredicted RBP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 GPR65Q8IYL9 337 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 RIBC1Q8N443 379 aaPredicted RBP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 EXD1Q8NHP7 514 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 MAGEC3Q8TD91 643 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 EDEM1Q92611 657 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 TMEM176AQ96HP8 235 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 TCF25Q9BQ70 676 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 SYT15Q9BQS2 421 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 ACBD6Q9BR61 282 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 B3GNT4Q9C0J1 378 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 TLR9Q9NR96 1032 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINC00538-201ENST00000626109 PARVAQ9NVD7 372 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 HMGXB4Q9UGU5 601 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 CDH9Q9ULB4 789 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 CNTN6Q9UQ52 1028 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 ACTL7BQ9Y614 415 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 TMEM265A0A087WTH1 108 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 GRM6O15303 877 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 SMPD2O60906 423 aa11.8□□□□□ -0.52
LINC00538-201ENST00000626109 SUN1O94901 812 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 302.7 ms