RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ALG9Q9H6U8 611 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 TLE6Q9H808 572 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 HPS4Q9NQG7 708 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 SLC38A7Q9NVC3 462 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 IMPAD1Q9NX62 359 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 USE1Q9NZ43 259 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 CAB39Q9Y376 341 aaPredicted RBP14.81□□□□□ -0.04
VPS36-207ENST00000611132 FAM32AQ9Y421 112 aaKnown RBP14.81□□□□□ -0.04
VPS36-207ENST00000611132 MAFO75444 373 aaPredicted RBP14.81□□□□□ -0.04
VPS36-207ENST00000611132 OR6B1O95007 311 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 ZNF12P17014 697 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 XRCC1P18887 633 aaPredicted RBP14.81□□□□□ -0.04
VPS36-207ENST00000611132 NANOGNBQ7Z5D8 188 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 CBR4Q8N4T8 237 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 NETO2Q8NC67 525 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 SIRPGQ9P1W8 387 aa14.81□□□□□ -0.04
VPS36-207ENST00000611132 MED26O95402 600 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 TOP3AQ13472 1001 aaPredicted RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 ANKRD52Q8NB46 1076 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 FAM120BQ96EK7 910 aaKnown RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 HSFY1Q96LI6 401 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 C6orf62Q9GZU0 229 aaPredicted RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 POPDC2Q9HBU9 364 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 UTP6Q9NYH9 597 aaKnown RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 DSEQ9UL01 958 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 MFN2O95140 757 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 ZBTB11O95625 1053 aaPredicted RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 CTBP1Q13363 440 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 EEF1DP3Q658K8 133 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 PTRHD1Q6GMV3 140 aaKnown RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 UNC93AQ86WB7 457 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 ANKRD13AQ8IZ07 590 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 PRR11Q96HE9 360 aaPredicted RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 QKIQ96PU8 341 aaKnown RBP eCLIP14.8□□□□□ -0.046e-6■■□□□ 11.6
VPS36-207ENST00000611132 RMI1Q9H9A7 625 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 ZFYVE28Q9HCC9 887 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 NT5MQ9NPB1 228 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 ENTPD7Q9NQZ7 604 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 C8orf4Q9NR00 106 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 OLA1Q9NTK5 396 aaKnown RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 SNTG2Q9NY99 539 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 COL20A1Q9P218 1284 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 COQ6Q9Y2Z9 468 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 SETD1AO15047 1707 aaKnown RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 CCR1P32246 355 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 CNTN2Q02246 1040 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 MRPL28Q13084 256 aaKnown RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 KCNJ11Q14654 390 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 ZNF410Q86VK4 478 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 ATG16L2Q8NAA4 619 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 OR6J1Q8NGC5 347 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 S100ZQ8WXG8 99 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 SEPT8Q92599 483 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 EDEM1Q92611 657 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 ZFYVE19Q96K21 471 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 TMEM247A6NEH6 219 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 B4GALT4O60513 344 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 PARNO95453 639 aaKnown RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 ZNF682O95780 498 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 INSRRP14616 1297 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 UBA1P22314 1058 aaKnown RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 TKTP29401 623 aaKnown RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 GTF2A2P52657 109 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 DGCR6Q14129 220 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 SLC9B1Q4ZJI4 515 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 ZRANB3Q5FWF4 1079 aa14.8□□□□□ -0.04
VPS36-207ENST00000611132 HOPXQ9BPY8 73 aaPredicted RBP14.8□□□□□ -0.04
VPS36-207ENST00000611132 MDM4O15151 490 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 BNIP3LO60238 219 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 FAM20BO75063 409 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 PENKP01210 267 aaPredicted RBP14.79□□□□□ -0.04
VPS36-207ENST00000611132 CPB1P15086 417 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 GM2AP17900 193 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 ERCC2P18074 760 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 OGDHQ02218 1023 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 FSTL4Q6MZW2 842 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 LCLAT1Q6UWP7 414 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 OLFML1Q6UWY5 402 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 PCDH19Q8TAB3 1148 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 PHF12Q96QT6 1004 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 PNPLA8Q9NP80 782 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 XPNPEP1Q9NQW7 623 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 COL6A2P12110 1019 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 TSPAN8P19075 237 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 FSTL1Q12841 308 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 CERCAMQ5T4B2 595 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 FKBP1CQ5VVH2 108 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 ABHD15Q6UXT9 468 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 ZYG11AQ6WRX3 759 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 TMEM26Q6ZUK4 368 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 TRIM69Q86WT6 500 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 HM13Q8TCT9 377 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 HERPUD2Q9BSE4 406 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 SYT11Q9BT88 431 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 FBXO5Q9UKT4 447 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 SLC22A2O15244 555 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 CNOT3O75175 753 aaKnown RBP14.79□□□□□ -0.04
VPS36-207ENST00000611132 CILPO75339 1184 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 BPIFB6Q8NFQ5 453 aa14.79□□□□□ -0.04
VPS36-207ENST00000611132 GATA6Q92908 595 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms