RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 KNL1Q8NG31 2342 aa22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 FGF10O15520 208 aaPredicted RBP22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 CBFA2T2O43439 604 aa22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 TCF4P15884 667 aa22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 DNA2P51530 1060 aa22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 SLC14A1Q13336 389 aa22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 TEAD4Q15561 434 aa22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 IL27RAQ6UWB1 636 aa22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 PLPP6Q8IY26 295 aa22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 ARHGEF26Q96DR7 871 aa22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 TM6SF2Q9BZW4 377 aa22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 LRRC19Q9H756 370 aa22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 FNDC3AQ9Y2H6 1198 aaKnown RBP22.73■■□□□ 1.23
GTF2F1-204ENST00000594965 TRPM6Q9BX84 2022 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 A0A1W2PR77 199 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 EIF3CLB5ME19 914 aaKnown RBP22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 EEF2KO00418 725 aaKnown RBP22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 PRPSAP2O60256 369 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 CER1O95813 267 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 CYP1A2P05177 515 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 IL1R2P27930 398 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 GKP32189 559 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 PCK1P35558 622 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 GEMIN4P57678 1058 aaKnown RBP22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 SERINC3Q13530 473 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 CCDC122Q5T0U0 273 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 SPECC1LQ69YQ0 1117 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 ALKBH5Q6P6C2 394 aaKnown RBP22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 TRIM69Q86WT6 500 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 VSTM4Q8IW00 320 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 NETO2Q8NC67 525 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 BTBD6Q96KE9 485 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 EIF3CQ99613 913 aaKnown RBP22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 HDAC8Q9BY41 377 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 HECAQ9UBI9 543 aaPredicted RBP22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 ANKRD36A6QL64 1941 aa22.72■■□□□ 1.23
GTF2F1-204ENST00000594965 NCOR2Q9Y618 2525 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 VILLO15195 856 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 BUB1O43683 1085 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 GSRP00390 522 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 ZNF883P0CG24 379 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 PMLP29590 882 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 MAT2AP31153 395 aaKnown RBP22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 EIF4A3P38919 411 aaKnown RBP22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 CTSKP43235 329 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 ACAP1Q15027 740 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 PARP15Q460N3 678 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 ERN2Q76MJ5 926 aaKnown RBP22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 ZNF354CQ86Y25 554 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 PSTKQ8IV42 348 aaKnown RBP22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 OR6K2Q8NGY2 324 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 CAMK1GQ96NX5 476 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 DNAJC7Q99615 494 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 NUP85Q9BW27 656 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 PREBQ9HCU5 417 aa22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 TPX2Q9ULW0 747 aaKnown RBP22.71■■□□□ 1.23
GTF2F1-204ENST00000594965 ZSCAN5CA6NGD5 496 aaPredicted RBP22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 KCNK3O14649 394 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 SH3BP5O60239 455 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 RNGTTO60942 597 aaKnown RBP22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 TMCC1O94876 653 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 FAM193AP78312 1265 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 ASTE1Q2TB18 679 aaPredicted RBP22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 TXNRD3NBQ6F5E7 133 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 RFX8Q6ZV50 586 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 PRPF39Q86UA1 669 aaKnown RBP22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 OR2AP1Q8NGE2 309 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 CELF6Q96J87 481 aaKnown RBP22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 SERAC1Q96JX3 654 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 NCAPGQ9BPX3 1015 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 SLC39A8Q9C0K1 460 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 SLC32A1Q9H598 525 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 ZDHHC6Q9H6R6 413 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 PDFQ9HBH1 243 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 DYRK4Q9NR20 520 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 TM7SF3Q9NS93 570 aa22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 CWC15Q9P013 229 aaKnown RBP22.7■■□□□ 1.22
GTF2F1-204ENST00000594965 ERCC2P18074 760 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 ITGB7P26010 798 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 CD38P28907 300 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 NDST2P52849 883 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 SNRPD1P62314 119 aaKnown RBP22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 TRIM14Q14142 442 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 PIGHQ14442 188 aaPredicted RBP22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 ZNF423Q2M1K9 1284 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 INO80DQ53TQ3 878 aaPredicted RBP22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 PPP6R3Q5H9R7 873 aaPredicted RBP22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 ATXN7L2Q5T6C5 722 aaPredicted RBP22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 AFMIDQ63HM1 303 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 DBX2Q6ZNG2 339 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 ADAT2Q7Z6V5 191 aaKnown RBP22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 ARHGAP12Q8IWW6 846 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 NIPA2Q8N8Q9 360 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 OR8K1Q8NGG5 319 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 CASKIN2Q8WXE0 1202 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 PPP1R16AQ96I34 528 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 AASDHPPTQ9NRN7 309 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 ANAPC7Q9UJX3 599 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 CABIN1Q9Y6J0 2220 aa22.69■■□□□ 1.22
GTF2F1-204ENST00000594965 H0Y8X5 98 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms