RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PRKD2Q9BZL6 878 aa14□□□□□ -0.17
TPM1-215ENST00000558868 MUC3BQ9H195 1237 aa14□□□□□ -0.17
TPM1-215ENST00000558868 PDFQ9HBH1 243 aa14□□□□□ -0.17
TPM1-215ENST00000558868 ATP13A1Q9HD20 1204 aa14□□□□□ -0.17
TPM1-215ENST00000558868 SSU72Q9NP77 194 aaKnown RBP14□□□□□ -0.17
TPM1-215ENST00000558868 UBP1Q9NZI7 540 aa14□□□□□ -0.17
TPM1-215ENST00000558868 DNMT3BQ9UBC3 853 aaKnown RBP14□□□□□ -0.17
TPM1-215ENST00000558868 SOX13Q9UN79 622 aa14□□□□□ -0.17
TPM1-215ENST00000558868 SMG5Q9UPR3 1016 aaKnown RBP14□□□□□ -0.17
TPM1-215ENST00000558868 EYSQ5T1H1 3165 aa14□□□□□ -0.17
TPM1-215ENST00000558868 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 LEFTY2O00292 366 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 USP12O75317 370 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 PMPCBO75439 489 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 RFPL2O75678 378 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 KRT38O76015 456 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 ARHGEF15O94989 841 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 BRAFP15056 766 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 HOXD9P28356 352 aaPredicted RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 SLC18A1P54219 525 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 WNT3AP56704 352 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 MGAT5Q09328 741 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 CDH18Q13634 790 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 LAMB3Q13751 1172 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 RNF219Q5W0B1 726 aaPredicted RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 CXorf57Q6NSI4 855 aaKnown RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 KDELC1Q6UW63 502 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 TMEM135Q86UB9 458 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 SRRM1Q8IYB3 904 aaKnown RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 CMTM8Q8IZV2 173 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 CYP4X1Q8N118 509 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 CARNMT1Q8N4J0 409 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 PPM1NQ8N819 430 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 ZNF557Q8N988 423 aaPredicted RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 TDRD5Q8NAT2 981 aaKnown RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.99□□□□□ -0.17
TPM1-215ENST00000558868 PPHLN1Q8NEY8 458 aaKnown RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 MRRFQ96E11 262 aaKnown RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 CINPQ9BW66 212 aaPredicted RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 TRABDQ9H4I3 376 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 ARNT2Q9HBZ2 717 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 MRM3Q9HC36 420 aaKnown RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 KCNK9Q9NPC2 374 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 NKIRAS1Q9NYS0 192 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.99□□□□□ -0.17
TPM1-215ENST00000558868 RPS6KL1Q9Y6S9 549 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 FAM169AQ9Y6X4 670 aa13.99□□□□□ -0.17
TPM1-215ENST00000558868 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.98□□□□□ -0.17
TPM1-215ENST00000558868 A0A0D9SEW6 157 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 ATP9BO43861 1147 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 MT-CYBP00156 380 aaPredicted RBP13.98□□□□□ -0.17
TPM1-215ENST00000558868 EPOP01588 193 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 MT-ND3P03897 115 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 SNRPAP09012 282 aaKnown RBP13.98□□□□□ -0.17
TPM1-215ENST00000558868 TCF3P15923 654 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 CD86P42081 329 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 SGSHP51688 502 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 CRADDP78560 199 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 EFTUD2Q15029 972 aaKnown RBP eCLIP13.98□□□□□ -0.17
TPM1-215ENST00000558868 TEAD2Q15562 447 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 ANKRD20A4Q4UJ75 823 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 CERCAMQ5T4B2 595 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 ALG1LQ6GMV1 187 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 FAM109BQ6ICB4 259 aaPredicted RBP13.98□□□□□ -0.17
TPM1-215ENST00000558868 RANBP10Q6VN20 620 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 LEKR1Q6ZMV7 388 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 MARK2Q7KZI7 788 aaKnown RBP13.98□□□□□ -0.17
TPM1-215ENST00000558868 PRPF39Q86UA1 669 aaKnown RBP13.98□□□□□ -0.17
TPM1-215ENST00000558868 SH3RF2Q8TEC5 729 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 DDI1Q8WTU0 396 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 TADA1Q96BN2 335 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 ZNF419Q96HQ0 510 aaPredicted RBP13.98□□□□□ -0.17
TPM1-215ENST00000558868 MRGPRX2Q96LB1 330 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 PSKH2Q96QS6 385 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 CDCA3Q99618 268 aaPredicted RBP13.98□□□□□ -0.17
TPM1-215ENST00000558868 APOL2Q9BQE5 337 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 KIFC1Q9BW19 673 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 TLE6Q9H808 572 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 PIDD1Q9HB75 910 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 PLAC1Q9HBJ0 212 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 PPANQ9NQ55 473 aaKnown RBP13.98□□□□□ -0.17
TPM1-215ENST00000558868 INTS9Q9NV88 658 aaKnown RBP13.98□□□□□ -0.17
TPM1-215ENST00000558868 HCFC1R1Q9NWW0 138 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 NSMCE4AQ9NXX6 385 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 TBC1D14Q9P2M4 693 aa13.98□□□□□ -0.17
TPM1-215ENST00000558868 CHD5Q8TDI0 1954 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 CXorf51AA0A1B0GTR3 108 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 CCDC195A0A1B0GUA6 201 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 TMEM120BA0PK00 339 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 PRPF4O43172 522 aaKnown RBP eCLIP13.97□□□□□ -0.17
TPM1-215ENST00000558868 C1QAP02745 245 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 SERPINF2P08697 491 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 CHN1P15882 459 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 GJA1P17302 382 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 PAMP19021 973 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 ADRA1DP25100 572 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 CCR2P41597 374 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 ZXDBP98169 803 aa13.97□□□□□ -0.17
TPM1-215ENST00000558868 GUCY1A3Q02108 690 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms