RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 POM121BA6NF01 834 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 M0QYT0 321 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 NEMP1O14524 444 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 AP1G1O43747 822 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 LEFTY1O75610 366 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 MT-CO1P00395 513 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 ANXA6P08133 673 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 ADRB3P13945 408 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 RRM1P23921 792 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 ITGB7P26010 798 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 GNA15P30679 374 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 PPP1R2P41236 205 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 THOP1P52888 689 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 PITX1P78337 314 aaPredicted RBP17.27■□□□□ 0.36
VPS29-204ENST00000548259 SLC20A2Q08357 652 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 PDCLQ13371 301 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 C22orf39Q6P5X5 142 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 ENOSF1Q7L5Y1 443 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 EHBP1Q8NDI1 1231 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 OR52K2Q8NGK3 314 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 ZNF606Q8WXB4 792 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 SCG3Q8WXD2 468 aaKnown RBP17.27■□□□□ 0.36
VPS29-204ENST00000548259 FAM81BQ96LP2 452 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 LENG8Q96PV6 779 aaPredicted RBP17.27■□□□□ 0.36
VPS29-204ENST00000548259 SLC2A13Q96QE2 648 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 SLC13A1Q9BZW2 595 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 RRN3Q9NYV6 651 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 CNTN6Q9UQ52 1028 aa17.27■□□□□ 0.36
VPS29-204ENST00000548259 CYSRT1A8MQ03 144 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 TSPAN6O43657 245 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 SNAP91O60641 907 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 PAGE1O75459 146 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 ITGB2P05107 769 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 PNOCQ13519 176 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 CRTC1Q6UUV9 634 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 C14orf80Q86SX3 495 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 ARHGEF19Q8IW93 802 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 ZSCAN1Q8NBB4 408 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 CHST14Q8NCH0 376 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 DENND6BQ8NEG7 585 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 RAB7BQ96AH8 199 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 ARHGEF26Q96DR7 871 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 SGF29Q96ES7 293 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 LIN37Q96GY3 246 aaPredicted RBP17.26■□□□□ 0.35
VPS29-204ENST00000548259 PRR11Q96HE9 360 aaPredicted RBP17.26■□□□□ 0.35
VPS29-204ENST00000548259 TBATAQ96M53 351 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 HEPHQ9BQS7 1158 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 CEP44Q9C0F1 390 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 TNKS2Q9H2K2 1166 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 SEPT10Q9P0V9 454 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 APOBEC3BQ9UH17 382 aaKnown RBP17.26■□□□□ 0.35
VPS29-204ENST00000548259 DOLKQ9UPQ8 538 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 PCDHGA7Q9Y5G6 932 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 FADS3Q9Y5Q0 445 aa17.26■□□□□ 0.35
VPS29-204ENST00000548259 A0A1W2PNU3 283 aaPredicted RBP17.25■□□□□ 0.35
VPS29-204ENST00000548259 LMO7DNF2Z398 122 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 K7ERQ8 282 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 PLD2O14939 933 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 ADCY5O95622 1261 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 L1CAMP32004 1257 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 DNA2P51530 1060 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 PMS1P54277 932 aaKnown RBP17.25■□□□□ 0.35
VPS29-204ENST00000548259 TAF5Q15542 800 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 C5orf22Q49AR2 442 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 PRRT3Q5FWE3 981 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 BRMS1LQ5PSV4 323 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 DPY19L3Q6ZPD9 716 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 C11orf57Q6ZUT1 292 aaPredicted RBP17.25■□□□□ 0.35
VPS29-204ENST00000548259 JAMLQ86YT9 394 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 FBXO39Q8N4B4 442 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 PCDH20Q8N6Y1 951 aaKnown RBP17.25■□□□□ 0.35
VPS29-204ENST00000548259 LMO3Q8TAP4 145 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 ASB12Q8WXK4 309 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 SMARCE1Q969G3 411 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 DHTKD1Q96HY7 919 aaPredicted RBP17.25■□□□□ 0.35
VPS29-204ENST00000548259 PPP1R13BQ96KQ4 1090 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 CCDC3Q9BQI4 270 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 BOCQ9BWV1 1114 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 C1QTNF7Q9BXJ2 289 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 WDCPQ9H6R7 721 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 SYNCQ9H7C4 482 aa17.25■□□□□ 0.35
VPS29-204ENST00000548259 TRIM49BA6NDI0 452 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 SMAD6O43541 496 aaKnown RBP17.24■□□□□ 0.35
VPS29-204ENST00000548259 GNA14O95837 355 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 OR1E1P30953 314 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 NOS2P35228 1153 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 BLKP51451 505 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 IRAK1P51617 712 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 PERM1Q5SV97 790 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 LINGO4Q6UY18 593 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 ZNF783Q6ZMS7 281 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 RAB11FIP2Q7L804 512 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 KREMEN1Q96MU8 473 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 PSMB7Q99436 277 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 SPON2Q9BUD6 331 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 C1QTNF2Q9BXJ5 285 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 GOLPH3LQ9H4A5 285 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 UBE2TQ9NPD8 197 aaPredicted RBP17.24■□□□□ 0.35
VPS29-204ENST00000548259 SEPT3Q9UH03 358 aa17.24■□□□□ 0.35
VPS29-204ENST00000548259 PADI4Q9UM07 663 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms